KEGG   Raphanus sativus (radish): 108861012
Entry
108861012         CDS       T06014                                 
Name
(RefSeq) elongation factor 1-alpha 1
  KO
K03231  elongation factor 1-alpha
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108861012
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsz03019]
    108861012
   03016 Transfer RNA biogenesis [BR:rsz03016]
    108861012
   03012 Translation factors [BR:rsz03012]
    108861012
   04131 Membrane trafficking [BR:rsz04131]
    108861012
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rsz04147]
    108861012
Messenger RNA biogenesis [BR:rsz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     108861012
Transfer RNA biogenesis [BR:rsz03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    108861012
Translation factors [BR:rsz03012]
 Eukaryotic type
  Elongation factors
   108861012
Membrane trafficking [BR:rsz04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    108861012
Exosome [BR:rsz04147]
 Exosomal proteins
  Proteins found in most exosomes
   108861012
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 AAA_22 SRPRB
Other DBs
NCBI-GeneID: 108861012
NCBI-ProteinID: XP_018490348
UniProt: A0A6J0M496
Position
5:22370805..22373289
AA seq 449 aa
MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGLLKPGMVVTFAPSGLTTEVKSVEMHHESLVEALPGDNVGFNV
KNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
SEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVDKKDPTGAKVTKAAVKKGAK
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgggtaaagagaagtttcacatcaacattgtggtcattggccatgtcgactctggaaag
tcaaccaccactggtcacttgatctacaagctcggtggtattgacaagcgtgtcattgag
aggttcgagaaggaagctgctgagatgaacaagaggtccttcaagtatgcgtgggtgttg
gacaaacttaaggccgagcgtgagcgtggtatcaccattgacattgctctatggaagttc
gagaccaccaagtactactgcactgtcattgatgctcctggtcatcgtgatttcatcaag
aacatgattactggtacctcccaggctgattgtgctgtcctcatcattgactccaccact
ggtgggtttgaagctggtatctccaaggatggtcagacccgtgagcatgctctccttgct
ttcacccttggtgtcaagcagatgatttgctgctgtaacaagatggatgccaccactccc
aagtactccaaggctaggtacgatgagattatcaaggaggtgtcttcatacctgaagaag
gtcggatacaaccctgacaaaatcccatttgtcccaatctctggtttcgagggtgataac
atgattgagaggtccaccaaccttgactggtacaagggaccaactctccttgaggcactt
gaccagatcaacgagcccaagaggccatcagacaagcccctccgtctcccacttcaggat
gtctacaagatcggtggtattggaacggtgccagtgggtcgtgttgaaaccggtcttctc
aagcctggtatggttgtgacctttgctccatcagggttgaccactgaggttaagtctgtt
gagatgcaccacgagtctcttgtggaggcacttccaggtgacaacgtgggattcaatgtc
aagaatgttgctgtcaaggatctcaagcgtgggtatgttgcatccaactccaaggatgac
ccagctaagggtgctgccaacttcacttcccaggtcatcatcatgaaccaccctggtcag
attggtaacggttacgctccagttctcgactgccacacgtcccacattgctgtcaagttc
tctgagatcctgaccaagattgacaggcgttctggtaaggagatcgagaaggagcccaag
ttcttgaagaatggtgacgctggtatggtgaagatgactccaaccaagcccatggttgtt
gagaccttctctgagtacccacctcttggacgtttcgctgtgagggacatgaggcagact
gttgcagtcggtgtcatcaagagcgttgacaagaaggacccaaccggagccaaggtgacc
aaggctgccgtcaagaagggtgccaagtga

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