KEGG   Raphanus sativus (radish): 108861687
Entry
108861687         CDS       T06014                                 
Name
(RefSeq) protein transport protein SEC24 A
  KO
K14007  protein transport protein SEC24
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108861687
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108861687
Membrane trafficking [BR:rsz04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    108861687
SSDB
Motif
Pfam: Sec23_trunk Sec23_BS Sec23_helical zf-Sec23_Sec24 Gelsolin Vps36-NZF-N HVO_2753_ZBP
Other DBs
NCBI-GeneID: 108861687
NCBI-ProteinID: XP_018491118
UniProt: A0A6J0P555
Position
5:complement(2585411..2591000)
AA seq 1007 aa
MNTENRNFPARPPSSSPFASAPPPGVRPQSGGPETVGFRPPIRPFAPSGPPMAPPLTGGV
MRPGQAPLVSQVPGSRLPGPPPQPSSNSFPSPAYGGPPGGGSFQRFPTPPPPHSAPPPPQ
TLAGHLSPPMSFRPQQPMAPVTMGPPPQSMTSGLPGGGFASPPGPGFQQSMPPVNPSYPG
YPSNQVSQGPPKPFQSLPQGPPSTVSSYPPQTGGFGQHPGQQNLHPGYAPPTSNVQGLVE
DFNSLSLSNIPGSLEPGLDHTSFPRPLEGDVEPSSFSEAYPMNCHSRYLRLTTSAIPNSQ
SLASRWHLPLGAVVCPLAEAPEGEEVPLIDFGSSGIIRCRRCRTYVNPYVTFTDSGRKWR
CNICSMLNDVPGEYFSHLDATGRRMDMDQRPELTKGSVEIIAPTEYMVRPPMPPIYFFLI
DVSFSATKSGMLEVATQTIKSCLDNLPGYPRTQIGFITYDSTLHFYNMKSSLSQPQMMVV
SDLDDIFVPLPDDLLVNLSESRNVVEAFLDSLPLMFRDNVNVESAFGPALKAAYMVMNQL
GGKLLIFQNSLPSLGVGRLKLRGDDPRIYGTDKEYTLRVAEDTFYKQMAADCTKFQIGIN
VYAFSDKYTDIASLGTLAKYTGGQVYYYPGFQSSIHGDKLRHELARDLTRETAWESVMRI
RCGKGIRFSSYHGNFMLRSTDLLALPAVDCDKAYAMQLTLEETLLTTPTVYFQVALLYTA
SCGERRIRVHTAAAPVVTDLGEMYRQADTGSIVSVYSRLAIEKTLSSKLDDARNVIQQKI
VKALREYRNLHAVQHRLGSRLIYPESLKLLPLYGLAICKSTPLQGGPADASLDERCAAGF
TMMALPVKKLLKLLYPSLFRVDEWLLKPSADIDDLKDVLRRLPLAAESLDSRGLYIYDDG
FRLVLWFGRMLSPDIAKNLLGADFAAELSRVTLEEQENGMSKKLMRLIKKVRENDPSYHP
MCFLVRQGEQPREGFLLLRHLIEDQMGGSTSYVDWILQLHRQIQQNA
NT seq 3024 nt   +upstreamnt  +downstreamnt
atgaatacagagaatcggaattttccagctaggcctccgtcctcgtctccattcgcatct
gctccgccgccaggggttcgacctcaatccggaggaccagagacggttggttttagacca
cctataaggcctttcgcaccttctggtcctcctatggctccaccactaacggggggtgtg
atgaggcctggccaagctcctttggtttctcaggttccagggagtagacttccaggtcct
cctccacagccatcttcgaattcgtttccttcaccagcttatggtggtcctcctggtggc
ggttcttttcagcggtttccaactcctcctcctcctcatagtgctccaccaccacctcaa
actcttgcaggtcacttatcgcctccgatgtcttttcgcccgcagcaaccaatggcgcct
gtgacaatgggacctcctccgcagagtatgacttctggtttacctggaggaggatttgct
tctccccctggtcctggttttcaacagtccatgcctccagttaatccgtcttatcctggt
tatcccagcaatcaggtctcacagggtcccccaaagccgttccagtctctacctcagggt
cctccgtctacagtctcatcgtatcctcctcagacaggaggttttggtcagcacccagga
cagcagaatctgcatccaggctatgcgcctcctaccagtaacgttcaaggtttggttgaa
gatttcaattcgctttccctttcaaatattcccgggtcgcttgagccaggacttgatcat
acctcattcccaaggccattggaaggtgacgtggagccaagttcgttttctgaagcgtac
cccatgaattgtcattctagatatctgcggctgacaactagtgcgattccaaattcccag
tctctggcgtcgaggtggcatttgcctctaggagctgtggtttgtccacttgctgaggct
cctgaaggggaggaagtaccacttattgattttggctcaagtggtatcatccgctgcaga
agatgccgtacctatgtgaatccttatgttacttttactgattctggaagaaagtggcgg
tgtaatatttgttctatgcttaatgatgtgcctggtgaatacttctcacacttagatgct
actggccgaagaatggacatggatcaaaggcctgagctgacaaagggaagtgttgaaatc
attgctccaacagaatacatggttcggcctccgatgccaccaatctacttcttcctcatc
gatgtttcattttctgctactaaaagtgggatgcttgaggttgctactcaaacgattaag
tcttgtttggataacctgcctggttatcccagaactcaaattggatttattacttatgac
agcactttacatttttacaacatgaagtcatctttgagtcagccgcaaatgatggtcgtc
tcggatctagatgatatatttgtcccattaccggatgatctccttgtcaatctatctgag
tctagaaatgtagtggaagcctttttggacagtctgcctctgatgtttcgagataatgtc
aatgtggaatcggcttttggtccagccctcaaagcggcgtacatggttatgaatcaactt
ggtggcaagttgctaattttccagaactcgttaccttctcttggtgttgggcgtttaaag
ttgcgcggagatgatcctcgcatctatggaactgacaaagaatatactttaagagtagct
gaagataccttctataaacaaatggctgcagattgtaccaagttccagataggaattaat
gtttacgcgttcagtgataagtacactgatattgcctccttagggactctggcaaaatac
actggaggacaggtgtactactatccaggcttccaatcgtctatccatggagacaagtta
agacacgagctggctagagacctgacaagagaaactgcgtgggaatccgttatgcgaata
agatgtggaaaaggaattcgattctcgtcctaccatgggaatttcatgctaaggtctact
gacctgcttgctcttcctgctgtcgactgtgacaaagcatatgcaatgcagctaacactg
gaagagacattgcttacaactccgacggtgtatttccaagtcgctttactatacactgct
tcttgcggagagaggcgtataagggtacacacagctgctgcaccagtggttacagatctt
ggagagatgtatagacaagcagacaccggttccattgtctctgtatattctagattagca
attgagaaaaccttatcctcaaaattggatgatgcacggaatgtcatacagcaaaagatt
gttaaagctctcagagaatatcgtaatcttcacgcggtgcagcatcggttggggtctaga
ttaatatacccggagtctctgaagttattgccactgtacggattggcaatttgtaagtcc
actcctcttcaaggtggacctgctgacgcttcacttgacgagcgctgtgcggcaggcttc
accatgatggctctgcctgtcaaaaagctattaaagctgttatatcccagtttattccgt
gttgatgagtggctcttaaagccatcagcagacattgatgaccttaaagacgtactaagg
agattgcctctggctgcagagagtttggattctagaggcctttacatatatgatgatggt
tttcgattggttttgtggtttggccgtatgctttcacctgacattgctaaaaatcttctt
ggggctgactttgcagcagagctctcaagggttacattggaagagcaagagaatgggatg
tcgaagaagctaatgaggctgataaagaaagtgagggagaatgatccgtcatatcatccc
atgtgtttcctagtgaggcaaggagaacaaccccgagaaggcttccttctcctccgacat
ctcattgaagaccagatgggcggttcgactagttatgttgactggattctgcaacttcac
cgccagatccaacaaaatgcataa

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