KEGG   Raphanus sativus (radish): 108862159
Entry
108862159         CDS       T06014                                 
Name
(RefSeq) protein transport protein SEC24 A
  KO
K14007  protein transport protein SEC24
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108862159
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108862159
Membrane trafficking [BR:rsz04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    108862159
SSDB
Motif
Pfam: Sec23_trunk Sec23_BS Sec23_helical zf-Sec23_Sec24 Gelsolin Vps36-NZF-N HVO_2753_ZBP
Other DBs
NCBI-GeneID: 108862159
NCBI-ProteinID: XP_056841890
UniProt: A0A9W3BRE1
Position
5:38645754..38650841
AA seq 1042 aa
MILQLRVKSSSGHDLKPIAAVESVSCCASSRPFPLSHSLRAIVNMENQGYPNFQARPPPS
SSSPFASAPPPGVRPQSGGPETVGFRPPTRPFTPSAPPVAPPVGAMRPFQSPLVSQIPGQ
GIRPPPPPPSSNSFPSTTYGPPGGGSFQRFPTPPPPSGPPPPQTLAGHLSPPMSLRPQQP
MGPPPQSMTSGVPGGYASPPPAPGFQQSMPPVNPSYPGVGGPPQPSFPGYPSNQVLQGPP
SSYPPQTGGFAQHPGQQNMHPSYAPPTSTVQALAEDFNSLSLTNIPGSLEPGLDRASFPR
PLDGDVEPNSFAEMYPMNCHSRYLRLTTSAIPSSQSLASRWHLPLGAVVCPLAEAPEGEE
VPLIDFGSSGIIRCRRCRTYVNPYVTFTDSGRKWRCNICSMLNDVPGEYFSHLDATGRRM
DMDQRPELTKGSVEIIAPTEYMVRPPMPPIYFFLIDVSFSAAKSGMLQVAAQTIKSCLDN
LPGYPRTQIGFITYDSTLHFYNMKSSLSQPQMMVVSDLDDIFVPLPDDLLVNLSESRNVV
EAFLDSLPLMFQNNVNVESAFGPALKAAYMVMNQLGGKLLIFQNSLPSLGAGRLKLRGED
PRVYGTDKEYTLRVAEDNFYKQMAADCTKFQIGINVYAFSDKYTDIASLGTLSKYTGGQV
YYYPGFQSSIHGDKLRHELARDLTRETAWESVMRIRCGKGIRFSSYHGNFMLRSTDLLAL
PAVDCDKAYAMQLTLEETLLTTPTVYFQVALLYTASCGERRIRVHTAVAPVVTDLGEMYR
QADTGSIVSVYTRLAIEKTLSGKLDDARNVIQQKIVKALREYRNLHSVQHRLGSRLIYPE
SLKFLPLYGLAICKSTPLQGGPADASLDERCAAGFTMMSLPVKKLLKLLYPNVFRVDEWL
LKPSADLDDLKDVLKRLPLAAENLDSRGLYIYDDGFRLVLWFGRMLSPDIAKNLLGADFA
AELSRVTLQEQENGMSKKLMRLIKKVRENDQSYHPMCFLVRQGEQPREGFLFLRYLIEDQ
MGGSTSYVDWILQIHRHVQQNA
NT seq 3129 nt   +upstreamnt  +downstreamnt
atgattctccaactacgtgtcaaatcttcttcgggtcacgatctgaagccgatcgctgct
gtagaatcagtttcctgctgcgcaagctctcgacctttccctctctctcactcacttcga
gcaatagtgaatatggagaatcaaggttatccgaattttcaagctaggcctcctccgtcc
tcctcctctccatttgcatctgctccgccgccaggtgttcgacctcaatccggtgggcca
gagacggttggctttagaccacctacaaggcctttcacaccttctgctcctcctgtggct
ccaccagtgggtgcaatgaggcctttccagtctcctttggtttctcagattccaggtcaa
gggattagacctccacctccaccgccatcttcaaattcgtttccatctacaacttatggt
cctcctggtggtggctcttttcagcgttttccaactcctcctcctcctagtggtccacca
ccacctcaaactctcgcaggtcacttatcgcctccaatgtctcttcgcccacagcaacca
atggggcctccgccacaaagtatgacttctggggtgcctggaggatatgcttctcctccc
cctgcacctggttttcaacagtccatgcctccagttaatccgtcttatcctggtgttggt
ggtccgccgcagccatcttttcctggttatcccagcaaccaggtcttacagggtcccccg
tcatcatatcctcctcagacaggaggttttgctcagcatccaggacagcagaacatgcat
ccgagctatgcacctccgaccagcaccgtacaagccttggccgaagatttcaattcgctg
tcccttaccaatattccgggttcgcttgagccaggacttgatcgagcctcgtttccaagg
ccgttggatggtgacgtggagccaaattcgtttgctgaaatgtaccctatgaattgccat
tctagatacctacgtctgacaactagcgctataccaagttcccagtctctggcgtcgagg
tggcatttgcctctaggagctgtggtttgtccacttgctgaggctcctgaaggggaggaa
gtaccacttattgattttggttcaagtggcatcatccgctgcagaagatgccgtacctat
gtgaatccttatgtgacgtttacagattctggaagaaagtggcggtgtaatatttgttct
atgcttaatgatgtgccgggtgaatatttctcacatttggatgctactggccgaagaatg
gacatggatcaacggcctgagctgacaaagggcagtgttgaaatcattgctccaacagaa
tacatggttcggcctccgatgccacccatctacttcttcctcattgatgtttcattttcg
gctgctaaaagtgggatgcttcaggttgctgctcagacgattaagtcttgtttggataac
ctgcctggttatcccagaactcaaattggatttattacttatgacagcacgttacatttt
tacaacatgaagtcgtctttgagccaaccgcaaatgatggtggtttcagatctagatgat
atatttgtaccattgccggatgatctccttgtcaatctatctgaatctagaaatgtggtg
gaagcctttttagacagtctgcctctgatgtttcaaaataatgtcaatgtggaatcggct
tttggtccagccctcaaagcggcgtacatggttatgaaccaacttggtggcaagttgtta
attttccagaactcgttaccttctctgggtgctgggcggctaaagttgcgcggagaggat
cctcgtgtctatggaactgacaaagaatatacgttaagggtagcggaagacaacttctat
aagcaaatggctgccgattgtaccaagttccagataggaattaacgtgtatgcattcagt
gataagtacactgatattgcctccttagggactctgtcaaaatacactggaggacaggtg
tactattatccaggcttccaatcatctattcatggagacaagttgagacacgaactagct
agagaccttacaagggaaactgcctgggaatccgttatgagaataagatgtggaaaagga
attcgtttctcttcctaccatggaaacttcatgctaaggtctactgacctgcttgctctt
cctgctgttgactgtgacaaagcatatgcaatgcagctgactctggaagagacattgcta
acaaccccgacggtgtatttccaagtcgccttactatatactgcttcttgcggagagagg
cgtataagggtacacacagcagttgcgccagtggttacggatctcggagagatgtataga
caagcagacaccggttccattgtctctgtatatactagattagcaattgagaaaactttg
tccggaaaattggatgatgcaagaaatgttatacaacaaaagattgtgaaagctctcaga
gagtatcggaatctgcactcggtgcagcaccggttggggtctagattaatatacccggag
tctctgaagttcttgccattgtacggattggcaatttgtaagtccactcctcttcaaggt
ggacctgctgatgcttcacttgacgagcgctgtgcggcaggcttcaccatgatgtctctg
cctgtcaaaaagctattgaaactgttatatcccaatgtattccgtgttgacgagtggctc
ttaaagccatcagcagatcttgatgaccttaaggacgtactaaagagattgcctctggct
gcagaaaatttggattctagaggcctttacatttatgatgatggttttcgattggttttg
tggtttggccgaatgctttcacctgatattgctaaaaatcttcttggggctgactttgca
gcagagctctcgagggtaacactgcaagagcaagagaatgggatgtcgaagaagctgatg
aggctgataaagaaagtgagggagaatgatcagtcatatcatcccatgtgtttcctagtg
aggcaaggagaacaaccccgagaaggcttccttttcctccgatatctcattgaggaccag
atgggtggttccactagttacgttgattggattctgcaaattcaccgccacgtccaacaa
aatgcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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