KEGG   Raphanus sativus (radish): 108862966
Entry
108862966         CDS       T06014                                 
Name
(RefSeq) ubiquitin receptor RAD23c
  KO
K10839  UV excision repair protein RAD23
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03420  Nucleotide excision repair
rsz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108862966
  09124 Replication and repair
   03420 Nucleotide excision repair
    108862966
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:rsz03051]
    108862966
   03400 DNA repair and recombination proteins [BR:rsz03400]
    108862966
Proteasome [BR:rsz03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    108862966
DNA repair and recombination proteins [BR:rsz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      108862966
SSDB
Motif
Pfam: XPC-binding UBA ubiquitin Rad60-SLD Dsc3_N CUE Rad60-SLD_2 UBA_3 TECR_N Crinkler
Other DBs
NCBI-GeneID: 108862966
NCBI-ProteinID: XP_018492743
UniProt: A0A6J0P9J9
Position
5:39609914..39612797
AA seq 403 aa
MKIFVKTLKGTHFAIEVKPEDSVADVKKNIETVQGADVYPAAKLMLIHQGKVLKDETTIE
ENKVAENSFIVIMMAKSKPASAGASSASAATSVQAKSLPTSSTQPSASPQPPASVAIPVA
TAPTPAAATETVAAPESVSATPPASTPAPESTPAGSQGDVYGQAASNLAAGSNLESTILQ
ILDMGGGAWDRDTVVRALRAAFNNPERAVEYLYSGIPEQAEVPPVARAPASSGQAANPPA
QTQQPAAAPATGPNANPLDLFPQGLPNVGANSGGGTLDFLRNSQQFQALRAMVQANPQVL
QPMLQELGKQNPNLMRLIQEHQADFLRLINEPVEGGAEGANLFGEGVPQPQAIQVTPEER
DAIERLEAMGFERALVLEVFFACNKNEELAANYLLDHMHEFEE
NT seq 1212 nt   +upstreamnt  +downstreamnt
atgaagatatttgtgaaaactctcaaggggactcacttcgcgatcgaagtaaaacctgag
gattcggttgctgatgtgaagaagaacatagagactgtgcagggagcagacgtttatcct
gctgccaaactcatgcttattcaccaagggaaagtgcttaaagatgagaccaccattgag
gagaacaaggttgctgagaacagttttattgtcattatgatggccaagagtaaacctgcc
tcagctggagcgtctagtgcatctgctgccacttcagtgcaggctaagtcgttgcctacc
tcatcaactcagccttcagcttcccctcagcctccagcttctgtagcaataccagttgca
actgcaccaacacctgcagctgccactgaaacggtggctgcacctgaatctgtttctgct
actccaccagcaagcactcccgcacccgaatcaactcctgcaggatctcagggtgatgtg
tacggacaagcagcatccaacctggccgctgggagtaatttagagagtaccattctgcag
attctggacatgggcggaggagcctgggatcgggacactgttgtccgtgcactccgtgct
gcatttaacaaccctgaaagagctgtggaatatctttactctgggatccccgagcaagct
gaagttccaccagttgctcgtgccccagcaagtagtgggcaggcggcaaatcctccagca
cagactcagcaacctgcagcggcacctgctactggtcctaatgcaaatccgttagatctc
ttcccacaggggttgccaaatgttggtgcaaactctggtggtggaacacttgacttcctg
cgcaacagccaacagttccaagctctgcgtgcaatggtgcaagcaaaccctcaagttctg
cagcctatgcttcaggaactgggaaagcaaaacccaaacttgatgcgattgattcaagaa
catcaagctgatttcttacgtttaatcaatgaaccagttgaaggaggggcggaaggggcc
aacctcttcggcgaaggagtgccacaaccacaggcgattcaagtcacacctgaggaacgt
gacgcaattgaaaggctggaagcgatgggatttgagagagcattggtgttggaagtgttc
tttgcgtgcaacaagaacgaagagttggctgcaaactatcttctggatcacatgcacgag
tttgaggaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (22)   

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