KEGG   Raphanus sativus (radish): 108863467Help
Entry
108863467         CDS       T06014                                 

Definition
(RefSeq) methionine--tRNA ligase, chloroplastic/mitochondrial
  KO
K01874  methionyl-tRNA synthetase [EC:6.1.1.10]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz00450  Selenocompound metabolism
rsz00970  Aminoacyl-tRNA biosynthesis
rsz01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    108863467
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    108863467
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rsz01007]
    108863467
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rsz03016]
    108863467
Enzymes [BR:rsz01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.10  methionine---tRNA ligase
     108863467
Amino acid related enzymes [BR:rsz01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   108863467
Transfer RNA biogenesis [BR:rsz03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    108863467
 Prokaryotic type
   Other AARSs
    108863467
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: tRNA-synt_1g tRNA-synt_1 tRNA-synt_1e Anticodon_1 Flavodoxin_2
Motif
Other DBs
NCBI-GeneID: 108863467
NCBI-ProteinID: XP_018493401
Position
Unknown
AA seq 610 aa AA seqDB search
MAARLNSSFHNALSFLNPFNTPLSKKPFSSRNSFRFSKKLASSPTRRALYSTSTLGSHEN
ADTFVLTTPLYYVNAPPHMGSAYTTIAADSIARFQRLLGKKVIFITGTDEHGEKIATSAA
ANGRNPAEHCDLISQSYRTLWKELDIAYDKFVRTTDPKHEAIVKEFYERVFANGDIYRAD
YEGLYCVNCEEYKDEKELLENNCCPVHQMPCVARKEDNYFFALSKYQKPLEEVLSQNPRF
VQPPYRLNEVQTWIKSGLRDFSISRALVDWGIPVPNDDKQTIYVWFDALLGYISALTEDN
EQQNLDTAVSLGWPASLHLIGKDILRFHAVYWPAMLMSAGLNLPKMVFGHGFLTKDGMKM
GKSLGNTLEPFELVQKFGPDAVRYFFIREVEFGNDGDYSEDRFIKIVNAHLANTIGNLLN
RTLGLLKKNCESTLVVDSTIAAEGVSLKDTVEKLVEKARTNYENLSLSTACEAVLEIGNA
GNSYMDQRAPWMLFKQGGDSAEAAAKDLVIILEVMRIIAVALSPIAPSLSLKIYSQLGFS
VDQFNSVTWNDTKWGELKGGQVMAQASPVFVRIELDAAEKDEEKKPKDSKKKGKAKVKVE
QQPQIVAEEA
NT seq 1833 nt NT seq  +upstreamnt  +downstreamnt
atggcggcgaggctgaactcttcgtttcacaacgccctctccttcttaaacccattcaac
actccgctcagcaagaaaccattctcttcgagaaacagcttcagattctccaaaaagctc
gcttcttccccgacgaggagagctctctactctacttccaccctcggaagccatgaaaac
gccgacactttcgtcctcacaactcctctctattacgtaaatgcccctccccacatgggc
agtgcctacaccaccatcgccgccgattcaatcgcccgtttccagaggctgcttgggaag
aaggttatctttatcacgggaacagatgagcacggtgagaagatagctacttcagcagct
gcgaacggacgcaaccctgctgagcattgtgatctcatttctcaatcttatcgaactctt
tggaaagaactcgatattgcttatgataagttcgttagaaccactgatcctaagcatgaa
gctatcgtgaaagagttctatgaacgtgttttcgccaacggtgatatatacagagctgat
tatgaagggctttactgtgttaactgtgaggaatataaggatgagaaagagctgcttgaa
aacaattgttgccctgttcatcaaatgccatgtgttgcaaggaaagaagataactacttc
tttgctctatccaaatatcagaaacctcttgaggaagttttgtctcagaatcctcgtttt
gtgcagcctccttaccgtctaaacgaggtgcaaacttggataaagagtggattaagggat
ttttcaatttctcgagcattagtagattgggggattcctgttcctaatgatgataagcaa
accatatatgtttggtttgacgctctactaggttacatatcagctctaacagaggacaat
gagcaacaaaatcttgacactgctgtttcattaggatggcctgcttcattgcatttgatc
ggaaaggatattctaagatttcacgctgtctattggcctgctatgctaatgtctgctggt
ctgaaccttccaaagatggtgtttggccatggatttctcacaaaggatggaatgaagatg
gggaaatcgttggggaacactctagaaccttttgagctggttcagaaatttggaccagat
gctgtcaggtacttcttcatccgggaggttgagtttggaaacgatggggactactcagaa
gaccgttttataaaaattgtcaatgcacatctcgccaacactataggaaacctccttaac
cgtactcttggccttcttaaaaagaactgtgagtccactttagtagtagattccactatt
gcagctgaaggagtttctttgaaagacacagtggagaagctggttgaaaaggcacggaca
aactatgagaatctttcattatcaacggcgtgtgaggctgtgttagagattgggaatgct
ggaaactcctacatggatcaaagagcaccttggatgcttttcaaacaaggtggtgactca
gcagaagctgcagccaaggatctggtgattatactcgaagtaatgagaatcatagccgtg
gcgttatccccaattgctccttccttaagcctgaagatatattcacagcttggcttctca
gttgatcagttcaacagcgtaacatggaatgacaccaagtggggagagctaaagggaggt
caagtaatggcgcaagcgagtcctgtttttgtaaggatcgagctggatgcagcagagaaa
gatgaagagaagaagccaaaggatagtaagaaaaagggtaaagctaaggtcaaagtagag
caacagcctcagattgtagcagaagaagcttag

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