KEGG   Ramlibacter tataouinensis: Rta_06650
Entry
Rta_06650         CDS       T01544                                 
Name
(GenBank) Candidate Acetyl/propionyl-CoA carboxylase, alpha subunit
  KO
K01968  3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
Organism
rta  Ramlibacter tataouinensis
Pathway
rta00280  Valine, leucine and isoleucine degradation
rta01100  Metabolic pathways
Module
rta_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:rta00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00280 Valine, leucine and isoleucine degradation
    Rta_06650
Enzymes [BR:rta01000]
 6. Ligases
  6.4  Forming carbon-carbon bonds
   6.4.1  Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
    6.4.1.4  methylcrotonoyl-CoA carboxylase
     Rta_06650
SSDB
Motif
Pfam: CPSase_L_D2 Biotin_carb_N Biotin_carb_C Biotin_lipoyl Biotin_lipoyl_2 ATP-grasp Dala_Dala_lig_C HlyD_3 HlyD_D23 LAL_C2 RnfC_N GCV_H ATPgrasp_ST NQRA DUF2118 ATP-grasp_4 GARS_A
Other DBs
NCBI-ProteinID: AEG91743
UniProt: F5XWY2
Position
691287..693317
AA seq 676 aa
MFQKILIANRGEIACRVAATARRLAVGTVAVYSDADARAKHVAACDEAVHIGGSAPRDSY
LRWERIIEAARATGAQAIHPGYGFLSENEEFAQACADAGLVFIGPPASAVQAMGLKAQSK
QLMEKAGVPLVPGYHGANQDAAFLQDQAGRIGYPVLIKASAGGGGKGMRAVEKAADFEAA
LASCKREAAGSFGDDAVLIEKYVQRPRHIEIQVFGDTHGNCLWLFERDCSVQRRHQKVLE
EAPAPGMAPELRRRMGEAAVAAARAVDYVGAGTVEFIVEQREGGKMDFFFMEMNTRLQVE
HPVTEAITGLDLVEWQLRVAAGEPLPLKQDQLRMHGHAIEARICAENPDNNFLPATGTLQ
VYRTPPCAEFLHPLPLGEGGGEGRRARVDSGVREGDAISPYYDSMIAKLIVHGADRAEAL
ARLDRALAQTHIVGPATNVQFLRQVVRSESFAKADLDTALIQREAPSLFHRRSMPLPLAA
AAAVARTLLDEKAQEGRDPFSRRDGWRSHGVATRRFEFDFDGERAKAELSYLHDGGLFLA
VGDAAGPLVVDTDGSACIDIRFAGLRERVWVYAEGETDHVFGGRGAATIVSVDLLAHAGE
GQAETGRLTAPMPGKVVSFAVQAGDAVRKGQALAVMEAMKMEHTIAAPADGTVAELLYGP
GDQVAEGAELLRLAAT
NT seq 2031 nt   +upstreamnt  +downstreamnt
atgttccagaagattctgatcgccaaccggggtgagatcgcctgccgcgtggccgccacg
gcccggcgcctggcggtgggcacggtggcggtctactcggatgccgatgcccgggccaag
cacgtggccgcctgcgacgaggcggtgcacatcggcggcagcgccccgcgcgacagctac
ctgcgctgggaacgcatcatcgaggccgcgcgggctaccggcgcgcaggccatccacccc
ggctacggcttcctcagcgagaacgaggagttcgcccaggcctgcgccgacgccggcctg
gtcttcatcggcccgccggcctcggccgtccaggccatggggctgaaggcgcaatccaag
cagctgatggagaaggccggcgtgcccctggtgccgggctaccacggcgccaaccaggac
gcggcgttcctccaggaccaggccgggcgcatcggctacccggtgctcatcaaggccagc
gccggcggcggcggcaagggcatgcgcgcggtcgagaaggctgccgacttcgaggcggcc
ctggcctcgtgcaagcgcgaggcggccggcagcttcggcgacgacgcggtgctgatcgag
aagtacgtgcagcggccgcggcacatcgaaatccaggtgttcggcgacacgcacggcaac
tgcctgtggctgttcgagcgcgactgctcggtgcagcggcgccaccagaaggtgctggag
gaggcaccggcccccggcatggcgcccgagctgcgccgccggatgggcgaggcggcggtg
gccgccgcgcgcgcggtggactacgtgggcgccggcacggtggagttcatcgtggagcaa
cgcgaaggcgggaagatggacttcttcttcatggagatgaacacccggctgcaggtggag
catccggtgaccgaggccatcaccggcctggacctggtggagtggcagctgcgcgtggcc
gccggcgagccgctgccgctgaagcaggaccagctgcgcatgcacggccatgccatcgag
gcccgcatctgcgccgagaaccccgacaacaacttcctgccggcgaccgggacgctgcag
gtgtaccgcacgcccccctgtgcagagttcctgcaccctctccctctgggagagggtggg
ggtgagggccgccgcgccagagtggactcgggcgtgcgcgagggcgacgcgatctcaccc
tactacgactccatgatcgccaagctcatcgtgcacggcgccgaccgcgccgaggcgctg
gcgcggctggaccgggcgctggcccagacccacatcgtgggcccggccaccaacgtgcag
ttcctgcgccaggtggtgcgcagcgagtccttcgccaaggccgacctggacaccgccctg
atccagcgcgaggcgccctccttgttccaccgcaggagcatgcccctgccgctggccgcc
gccgcggccgtggcccgcacgctgctggacgagaaggcacaggagggccgggacccgttc
agccggcgcgacggctggcgctcgcacggcgtggccacgcggcgcttcgaattcgacttc
gatggcgagcgtgccaaggccgagctgagctatctgcacgacggcgggctgttcctggcg
gtgggcgacgccgccgggccgctggtggtcgacaccgacggctctgcttgcatcgacatc
cgcttcgccggcctgcgcgagcgcgtctgggtctatgccgagggcgagaccgaccacgtg
ttcggcggccgcggcgcggcgaccatcgtgtcggtggacctgctggcccatgcgggcgag
ggccaggccgagaccggccggctcaccgcgcccatgccgggcaaggtcgtgtccttcgcc
gtccaggccggcgacgcggtgcgcaaggggcaggcgctggccgtgatggaggccatgaag
atggagcacacaattgccgcgccggccgacggcaccgtggccgagctgctgtacgggccg
ggcgaccaagtcgccgagggcgccgaactgctgaggctggcggcgacctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (43)   

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