KEGG   Ramlibacter tataouinensis: Rta_09680
Entry
Rta_09680         CDS       T01544                                 
Symbol
murD
Name
(GenBank) Candidate UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase (D-glutamic acid adding enzyme)
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
rta  Ramlibacter tataouinensis
Pathway
rta00470  D-Amino acid metabolism
rta00550  Peptidoglycan biosynthesis
rta01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rta00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Rta_09680 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Rta_09680 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rta01011]
    Rta_09680 (murD)
Enzymes [BR:rta01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     Rta_09680 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:rta01011]
 Precursor biosynthesis
  Amino acid ligase
   Rta_09680 (murD)
SSDB
Motif
Pfam: Mur_ligase_M MurD-like_N Mur_ligase_C AlaDh_PNT_C 2-Hacid_dh_C NAD_binding_7 NAD_binding_8 ThiF
Other DBs
NCBI-ProteinID: AEG92052
UniProt: F5XZM3
Position
999983..1001515
AA seq 510 aa
MGRPGEGWSALQDQHVLVLGLGASGLAMARWCARGGARVTVADTREAPPQVAALREQLPQ
ASFVAGPFTGALLEGVQAVFRSPGLAPAQVAPVWDAARAAGLRVGGELSLFCGGLAQLQA
EQGYAPAVLAVTGTNGKTTVTSLAGQLVERSGRTVAVAGNIGPTLLDTLAAKMDAQALPQ
VWVLELSSFQLEGMEGFEPTAATVLNLTQDHLDWHGGMRAYAAAKARIFGTRGLMVLNRE
DPAVMAMLPAPAKLKGGKTEQREHVGFGADMPQRPGDYGIEVVNGMAWLVRALEADETQK
RRRDADEEIHIQRLMPADALRIRGRHNAVNALAALALATAAGCPLAPMLYGLREYRGEPH
RVEPVGMVGEVEFFDDSKGTNVGATAAALNGLGAERKLVVILGGEGKGQDFSPLAAPVAR
FCRAAVLIGRDAPQIRAALEGAGVALLDAASMEEAVSLATQRSQPGDAVLMSPACASFDM
FRNYEHRAEVFREAVARLAAEAGTSLEVVQ
NT seq 1533 nt   +upstreamnt  +downstreamnt
ttggggcggcccggcgaaggctggtccgccctccaggaccagcacgtcctcgtcctcggc
ctcggcgcgtccgggctggcgatggcgcgctggtgcgcgcgcggcggcgcgcgcgtgacc
gtggcggacacgcgcgaggcgccgccgcaggtggccgcgctgcgcgagcagctgccgcag
gcctcgttcgtcgccggccccttcaccggggcgctgctggagggcgtgcaggccgtgttc
cgcagccccgggctggcgccggcgcaggtggccccggtgtgggacgccgcccgcgcggcc
ggcctgcgggtcggcggcgagctgagcctgttctgcggcgggctggcccagctgcaggcc
gaacagggttacgcgccggcggtgctggccgtcaccggcaccaacggcaagaccacggtc
acctcgctggccggccagctggtggaacgcagcggccgcacggtggcggtggccggcaac
atcggccctacgctgctggacacgctggccgcgaagatggacgcgcaggcgctgccgcag
gtctgggtgctggagctgtccagcttccagctcgagggcatggaaggcttcgagcccacc
gcggccacggtgctcaacctcacccaggaccatctggactggcacggcggcatgcgggcc
tacgcggcggccaaggcccgcatcttcggcacccgcggcctcatggtcctgaaccgggaa
gaccccgcggtgatggccatgctgccggcgccggccaagctcaagggcggcaagaccgag
cagcgcgagcatgtgggcttcggcgccgacatgccgcagcgtcccggcgactacggcatc
gaggtggtcaacggcatggcatggctggtgcgcgcgctggaagccgacgagacgcaaaag
cgccggcgcgatgccgacgaagagatccacatccagcgcctgatgccggccgacgcgctg
cgcatccgcggccgccacaacgcggtgaacgcgctggccgcgctggccctggcgacggcg
gccggctgcccgctggcgcccatgctgtacggcctgcgcgagtaccgcggcgagccgcac
cgggtcgagccggtgggcatggtgggcgaggtcgagtttttcgacgacagcaagggcacc
aacgtcggcgccaccgcggcggcgctgaatggtctcggtgccgagcgcaagctggtcgtg
atcctggggggcgagggcaaggggcaggacttctccccgctggccgcgccggtggcgcgc
ttctgccgggcggctgtgctgatcggccgcgacgcgccgcagatccgcgccgcgctggaa
ggcgcgggggtggcgctgctggacgccgcctcgatggaggaggcggtctcgctggccacg
cagcgcagccagcccggcgacgccgtgctgatgtcgccggcctgcgccagcttcgacatg
ttccgcaactacgagcaccgcgccgaggtgttccgcgaggccgtggcccggctcgcggcc
gaggccgggacctcgctggaggttgtccaatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (30)   

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