KEGG   Ramlibacter tataouinensis: Rta_09720
Entry
Rta_09720         CDS       T01544                                 
Symbol
ddlA
Name
(GenBank) Candidate D-alanine-D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
rta  Ramlibacter tataouinensis
Pathway
rta00470  D-Amino acid metabolism
rta00550  Peptidoglycan biosynthesis
rta01100  Metabolic pathways
rta01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:rta00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Rta_09720 (ddlA)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Rta_09720 (ddlA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Rta_09720 (ddlA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rta01011]
    Rta_09720 (ddlA)
Enzymes [BR:rta01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     Rta_09720 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:rta01011]
 Precursor biosynthesis
  Amino acid ligase
   Rta_09720 (ddlA)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 ATP-grasp_4 ATPgrasp_ST RimK TTL Neuropep_like
Other DBs
NCBI-ProteinID: AEG92056
UniProt: F5XZM7
Position
1005232..1006203
AA seq 323 aa
MSGTFNFGKVAVLMGGQSAEREVSLMSGSGVLKALQAKGVDAHAFDPAQRDLSELKREGF
GRCFIALHGRFGEDGTVQGALELLGIPYTGSGVMASSIAIDKVMTKRVWLAEGIPTPKYR
LLRRGAYQRGQVVRIPDELGLPLIVKPAREGSSIGVAKVQGYSEMQGAVDAAAALDADVL
CEQFVSGDEVTCPILGTGDAARALPVIRIVAPAGNYDYQNKYFTDDTQYLVPCGLPAGEE
AAIQALVLKAYRVLGCRGWGRIDVMIDGRTRQPSLLEINTSPGMTGHSLVPMSARAAGIS
YEDLCVQLLASATLDHAKEAAIP
NT seq 972 nt   +upstreamnt  +downstreamnt
atgagcggtaccttcaactttggaaaggtggctgtcctgatgggcggccagtcggccgag
cgcgaggtgtcgctcatgtccggcagcggcgtgctcaaggcgctgcaagccaagggcgtg
gacgcgcacgccttcgatccggcgcagcgcgacctgtccgagctcaagcgcgagggcttc
gggcgctgcttcatcgccctgcacggccgcttcggcgaggacggcacggtgcagggcgcg
ctggagctgctgggcatcccctacaccggctcgggcgtgatggcctcgtccatcgccatc
gacaaggtcatgaccaagcgggtctggctggccgagggcatcccgacgccgaagtaccgg
ctgctgcggcgcggcgcctaccagcgcgggcaggtggtccgcatccccgacgagctgggc
ctgccgctgatcgtcaagccggcgcgcgagggctcgtccatcggcgtcgccaaggtccag
ggctattccgagatgcagggggccgtggacgcggccgccgcgctggatgccgacgtgctg
tgcgagcagttcgtctcgggcgacgaggtgacctgcccgatcctgggaacgggcgacgcg
gcgcgcgcgctgcccgtcatccgcatcgtcgcgccggcgggcaactacgactaccagaac
aagtacttcaccgacgacacccagtacctggtgccctgcggcctgccggcgggcgaggag
gcggccatccaggcgctggtgctcaaggcctaccgcgtgctgggctgccgcggctggggc
cgcatcgacgtgatgatcgacggcaggacgcgccagccctcgctgctggagatcaacacc
tcgccgggcatgaccgggcactcgctggtgcccatgtcggcgcgtgccgccggcatcagc
tacgaggacctgtgcgtccagctgctggcctcggccacgctggaccatgccaaggaggcg
gccatcccatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (34)   

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