KEGG   Ramlibacter tataouinensis: Rta_12040
Entry
Rta_12040         CDS       T01544                                 
Symbol
rluA
Name
(GenBank) Uracil hydrolyase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
rta  Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:rta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rta03009]
    Rta_12040 (rluA)
   03016 Transfer RNA biogenesis [BR:rta03016]
    Rta_12040 (rluA)
Enzymes [BR:rta01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     Rta_12040 (rluA)
    5.4.99.29  23S rRNA pseudouridine746 synthase
     Rta_12040 (rluA)
Ribosome biogenesis [BR:rta03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Rta_12040 (rluA)
Transfer RNA biogenesis [BR:rta03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    Rta_12040 (rluA)
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AEG92289
UniProt: F5Y1N8
Position
complement(1235194..1235832)
AA seq 212 aa
MLIHADADCIVVDKPAGLLCVPGRGPGKQECLAARVQQRFPDARVVHRLDMATSGLWLMA
RGAALQRAFGDAFARREVGKRYVAVVAGLLLPMPADAEGWSRIALPLAADWPNRPRQQVD
PHAGKPSLTLWRVLGHDAAAGSTRLELAPVTGRTHQLRVHLMALGHPILGDALYAPPEVA
ARAPRLLLHASALALPHPVSGAPLAFASPPPF
NT seq 639 nt   +upstreamnt  +downstreamnt
gtgctcatccatgcagatgccgactgcatcgtggtggacaagccggccgggctgctctgc
gtgcccggccgcggtcccggcaagcaggagtgcctggccgcccgggtacagcagcgtttc
cccgacgcgcgggtggtgcaccggctggacatggcgacctcgggcttgtggctgatggcg
cgcggcgcggccctgcagcgcgcgttcggcgacgccttcgcccggcgcgaggtcggcaag
cgttacgtggcagtggtggccggcctcctgcttccgatgcctgccgacgccgagggctgg
agccgcatagccctgccgctggccgccgactggcccaaccgcccgcggcagcaggtggac
ccgcacgccggcaagcccagcctcacgctctggcgcgtgctgggccacgacgcggcggcc
ggcagcacccgcctggagctggcgccggtgaccggccgcacgcaccagctgcgggtgcac
ctgatggcgctgggccaccccatactgggcgacgcgctgtacgcgccgcccgaggtggcg
gcccgggcgccgaggctgctgctgcacgccagcgccctggcgctgccgcacccggtgagc
ggggcgcccctggcctttgcctcgccgccgcccttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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