KEGG   Ramlibacter tataouinensis: Rta_19610
Entry
Rta_19610         CDS       T01544                                 
Symbol
truB
Name
(GenBank) Uracil hydrolyase
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
rta  Ramlibacter tataouinensis
Brite
KEGG Orthology (KO) [BR:rta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rta03016]
    Rta_19610 (truB)
Enzymes [BR:rta01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     Rta_19610 (truB)
Transfer RNA biogenesis [BR:rta03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Rta_19610 (truB)
 Prokaryotic type
    Rta_19610 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2
Other DBs
NCBI-ProteinID: AEG93053
UniProt: F5XXR8
Position
2074126..2075058
AA seq 310 aa
MHGVLLLDKPRGLSSNDALQKAKWLLRAEKAGHTGTLDPLATGVLPLCFGAATKFSQLHL
EADKTYEAVAVLGVKTTTGDAEGEVVSRQPAPELTADRLAQVQRQFTGALSQVPPMHSAL
KKDGKALYEYARAGEEVAREARAIMVHALELAAARTGSGQAAVRFIAKVSKGTYIRTLGE
DIGEALGCGAHLSLLRRLATGPFDLSQCVTLEALQDMAEDERLARLLPPQALLAGHGRVT
LDADNAGRFLSGLRRRGDWPDSEAVAVFGEQPPALLGTGHVKAGELIPGRLLSPIEIQQI
LHPQEQATTP
NT seq 933 nt   +upstreamnt  +downstreamnt
gtgcacggggtgctgctgctcgacaagcccaggggcctgtcgagcaacgacgccttgcag
aaggccaaatggctgctgcgggcggagaaggccggccacaccggcacgctggacccgctg
gccaccggcgtgctgccgctgtgcttcggcgccgccaccaagttcagccagctgcatctg
gaggcggacaagacctacgaggccgtcgcggtgctgggcgtgaagaccacgaccggcgac
gcggagggcgaggtggtttcgcgccagccggcgcccgagctgacggccgacaggctggcc
caggtgcaacgccagttcaccggggcgctgagtcaggtgccgcccatgcacagtgcgctg
aagaaggacggcaaggcgctgtacgaatacgcccgggcaggcgaagaggtcgcccgggaa
gcgcgcgccatcatggtccatgcgctggaactggccgcggcccgcaccgggtcgggacag
gcagccgtgcgctttatcgccaaggtcagcaagggaacctacatccgcaccctgggcgag
gacatcggcgaggcgctgggctgcggcgcgcacctgtccctgctgcgccggctggcgacc
gggcccttcgacctgtcgcagtgcgtgaccctggaggcgcttcaggacatggccgaggac
gagcgcctggcccgcctgctgccgccccaggccctgctggccggccacggccgtgtcacg
ctggacgccgacaatgccggccgcttcctctccggcctgcgccgtcgaggcgactggccg
gacagcgaggcggtggcggtgttcggcgaacaaccgccggcgctgctaggcaccggccac
gtcaaggccggcgaactgatcccggggcgtctgctgagccccatcgaaatccagcaaatc
ctgcacccgcaagaacaggcgaccaccccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system