KEGG   Ramlibacter tataouinensis: Rta_36050
Entry
Rta_36050         CDS       T01544                                 
Symbol
rpoA
Name
(GenBank) RNA polymerase alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
rta  Ramlibacter tataouinensis
Pathway
rta03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:rta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Rta_36050 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rta03021]
    Rta_36050 (rpoA)
   03400 DNA repair and recombination proteins [BR:rta03400]
    Rta_36050 (rpoA)
Enzymes [BR:rta01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Rta_36050 (rpoA)
Transcription machinery [BR:rta03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Rta_36050 (rpoA)
DNA repair and recombination proteins [BR:rta03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Rta_36050 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RNA_pol_L_2 RAD51D_N
Other DBs
NCBI-ProteinID: AEG94720
UniProt: F5Y1D6
Position
complement(3844146..3845135)
AA seq 329 aa
MQTNLLKPKAINVEQLGTNRAKVTLEPFERGYGHTLGNALRRVLLSSMVGYAATEVTIAG
VLHEYSSIDGVQEDVVSILLNLKGVVFKLHNRDEVTLSLRKDGEGVVTAADIQTPHDVEI
INPDHVIAHLSQGGKIDMQIKVEKGRGYVPGTMRRYADEPTKSIGRIVLDASFSPVKRVS
YTVESARVEQRTDLDKLVVEIETNGAITAEDAVRASAKILVEQLAVFAQLEGSELAAFDA
PVQRSSQQFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSL
NEIKEVLASRGLTLGMKLESWPPAGLDKR
NT seq 990 nt   +upstreamnt  +downstreamnt
atgcaaaccaacctgctgaaacccaaagccatcaacgtggaacagcttggcacgaaccgc
gccaaggtgacgctggagccgtttgagcgcggctacggccacacgctgggcaacgccctg
cgccgcgtgctgctgtcctcgatggtcgggtatgcggcaaccgaagtcaccatcgccggt
gtgcttcacgagtactcgtccatcgacggcgtccaggaagacgtggtcagcatcctgctg
aacctaaagggcgtggtcttcaagctgcacaaccgcgacgaggtcaccctgtcgctgcgc
aaggacggcgaaggcgtggtcacggccgccgacatccagacgccgcacgacgtcgagatc
atcaaccccgaccatgtgatcgcccacctgtcgcaaggcggcaagatcgacatgcagatc
aaggtcgagaagggccgcggctacgtgcccggcaccatgcgccgttacgccgacgagccg
accaagtcgatcggccgcatcgtgctggacgcttcgttctcgccggtcaagcgggtgagc
tatacggtcgagagcgcccgcgtcgagcagcgcaccgacctggacaagctggtggtggag
atcgagaccaacggcgccatcaccgccgaggacgcggtgcgcgcctccgccaagatcctg
gtcgagcagctggcggtgttcgcgcagctggagggcagcgagctggcggccttcgacgcg
ccggtgcagcgcagctcgcagcagttcgacccgatcctgctgcgcccggtcgacgagctc
gagctgacggtgcgctcggccaactgcctgaaggccgagaacatctactacatcggcgac
ctgatccagcgcaccgagaacgagctgctcaagacccccaacctgggccgcaagtcgctc
aacgagatcaaggaagtcctcgcctcgcgtggcctcacgctgggcatgaaactcgagagc
tggcccccggccggcctcgataagcgttaa

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