KEGG   Rathayibacter toxicus WAC3373: APU90_07025
Entry
APU90_07025       CDS       T04269                                 
Name
(GenBank) hypothetical protein
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
rtc  Rathayibacter toxicus WAC3373
Pathway
rtc00040  Pentose and glucuronate interconversions
rtc01100  Metabolic pathways
rtc02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rtc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    APU90_07025
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    APU90_07025
Enzymes [BR:rtc01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     APU90_07025
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-ProteinID: ALS57552
UniProt: A0A0C5BIP3
Position
complement(1548009..1549079)
AA seq 356 aa
MNPVLRSIALLALFVLVGAINFTSREFPATAVPHAPSSQEVRSNKTTDEITGATTLPTIS
EDSPRTEANSVDTLANAVAQHAHHIVITKSLYGGPVPIQITLRDPKGSNTVIEGVNGTTK
LINIQIRIIDNSYSGAIHDLIVRNLTLHGNISDLTNLSGSHTVAPGTGPNYEAVSIRGAR
NVLIDHITAYDTTDDLMSVTSQADQVTISNCTLFYSRSFADINPSIRWNWGFGPQPLAEE
RLGILVGKGRSDGYLYTNKLHVTLSHNHIGPLVRGRPLLRGNVHVVGNTFDNTQPHSGQY
ATIEVGSGGYVLVEKNTFDYSHNPIVIHLDSPNDPYALYVQNNNKFISTTGTIRIG
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgaatcccgtattgcgctctattgctctcctcgccctatttgtcttagtcggtgctatt
aattttacctctcgagaatttccagctaccgcagttccgcatgccccgtccagtcaggaa
gtgaggtcgaataaaaccaccgacgaaataactggagcaaccacacttccgaccatctca
gaggacagcccgcggacggaagcgaacagcgtcgacaccctcgccaacgctgtcgcgcag
cacgcgcaccacatcgttattaccaagtccctctacggtggcccggtgccgatccagatc
accctccgcgaccccaaaggaagcaatacggtgatcgagggtgtaaatggtacgacgaag
ttgatcaatatccagatccgcattattgataactcttactctggcgccatacatgacctt
attgtccgtaatcttacccttcacggcaacatcagcgatctgacgaacctctccggttca
catactgtggcccccggtaccgggccgaactatgaagcggtgtccattcggggtgctcgg
aacgttcttatcgaccacatcaccgcgtacgacactacggatgatctgatgtccgtcacc
tctcaagcagatcaagtcactatctcaaactgcacattgttttatagccgttcttttgcc
gatattaacccttcaatcaggtggaactggggattcggcccacaacctttagccgaagaa
cgattgggcatcctagtgggtaagggaagatctgacggctatttatacacaaataaactg
catgtcacactttctcataaccacatcggaccattggttcgtgggcggccgcttttgcgc
ggcaatgttcacgttgtgggtaacactttcgacaatacccagccacattccggtcagtac
gcgacaattgaggtaggtagcggcggttacgtcctcgtcgagaaaaacaccttcgactat
tcacacaaccccatcgttatccatctcgattccccaaatgatccctatgcactttatgtg
caaaataacaacaaatttatcagtaccaccggaactatcaggataggatag

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