KEGG   Rathayibacter tanaceti: GSU10_13980
Entry
GSU10_13980       CDS       T06377                                 
Name
(GenBank) hypothetical protein
  KO
K11531  lsr operon transcriptional repressor
Organism
rte  Rathayibacter tanaceti
Pathway
rte02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rte00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GSU10_13980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rte03000]
    GSU10_13980
Transcription factors [BR:rte03000]
 Prokaryotic type
  Other transcription factors
   Others
    GSU10_13980
SSDB
Motif
Pfam: Sugar-bind MarR_2 Sigma70_r4 HTH_Crp_2 MarR HTH_23 Prot_ATP_ID_OB_C
Other DBs
NCBI-ProteinID: QHC56626
Position
2959708..2960673
AA seq 321 aa
MPSLPLPAVRRPGPVAEERDLLLHRIATLYWVEGLTQSEIGERLSFGRVSVSRMLDEARS
RGVVRISVGPPEDRVAPLERELARRFALSDVRVAVSLPRGAAADEARLGRVAARLLTERL
PPGATLAVASSRSVLPTAQAVGGLATGVRVVEALGYHSRAAPEHSAAAVLAAGAAFTPLP
APFVSRSAARAEEARRRPAVRDALALARRSDAALLGLGSTAHFDGTGAVAPVSEALLEQA
RAAGAAGHALGQFFDRAGRPVASALDELRVGLALDELRAIPLRILVAHGSTKAEAIAAAA
TGGIASALVTDEATAEELLRR
NT seq 966 nt   +upstreamnt  +downstreamnt
atgccctctctccccctcccggccgtccgtcggcccggcccggtcgccgaggagcgcgac
ctcctcctgcaccgcatcgcgacgctctactgggtcgagggcctgacccagtccgagatc
ggcgagcggctctcgttcggccgcgtttcggtctcgaggatgctcgacgaggcgcgctcg
cggggcgtggtgcggatcagcgtcggcccgccggaggaccgcgtggccccgctcgaacgc
gagctcgcgcgccgcttcgccctctcggacgtaagggtcgcggtctcgctgccccgcggc
gcggcggccgacgaggcgcgcctggggcgggtcgcggcgcgcctcctgacggagcggctg
cctccgggcgcgaccctcgccgtcgcctccagccgctcggtgctgccgaccgcgcaggcc
gtgggcgggctcgccacgggcgtccgggtggtcgaggctctcgggtaccactcgcgtgcc
gctcccgagcactcggcggccgccgtgctcgccgccggcgccgcgttcacgccgctgccg
gctccgttcgtgtcgcgctcggcggcgcgggccgaggaggcgcgccgccggcccgcggtc
cgcgacgcgctcgcgctcgcccgccgcagcgacgccgcactgctcgggctcggctccacg
gcgcacttcgacggcaccggcgccgtcgccccggtctcggaggcgctgctcgagcaggcc
cgcgccgccggcgcagccggccatgcgctggggcagttcttcgaccgcgcgggccggccg
gtcgcctccgcgctggacgagctgcgcgtgggcctcgccctggacgagctgcgggcgatc
ccgctgcggatcctcgtcgcgcacggctccacgaaggcggaggcgatcgcagcagcggca
acgggcggcatcgcgtccgcgctggtcaccgacgaggccacggcggaggagctgctgcgc
cggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (7)   
   Pfam (7)   
All databases (13)   

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