KEGG   Rufibacter tibetensis: DC20_11295
Entry
DC20_11295        CDS       T04099                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
rti  Rufibacter tibetensis
Pathway
rti03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rti00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DC20_11295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rti03400]
    DC20_11295
DNA repair and recombination proteins [BR:rti03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DC20_11295
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      DC20_11295
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_19 AAA_22 AAA_16 AAA_5 AAA_30 AAA AAA_7 AAA_25 DUF87
Other DBs
NCBI-ProteinID: ALI99445
UniProt: A0A0P0C7P9
Position
2804038..2806074
AA seq 678 aa
MDFKLTSEFKPTGDQPKAIKELVRGIRTGEHAQVLLGATGTGKTFTVANVIQEVKKPTLV
LCHNKTLAAQLYGEFKQFFPDNAVEYFISYYDYYQPEAYIASSDVFIEKDLAINEEIEKL
RLHCTSALLSGRRDVIVVASVSCIYGIGNPEEFGKNVIPLAPGMKVSRNNLLYQFVSILY
SRTEVEFTRGTFRVKGDTVDIFPAYADFAYRIYFWGDEIESIQRIDPQSGKKIADEEGIS
LFPANLFVTGKDTLNQAINEIQFDMVAQHEYFLKEGRDGEAKRIKERTEFDLEMIRELGY
CSGIENYSRYFDRREPGARPFCLLDYFPDDFLMVIDESHATLPQVRAMWGGDRSRKTALV
EYGFRLPAAMDNRPLTFNEFESVMHQVIFVSATPGDYEIQKSEGVVVEQIIRPTGLLDPE
IEIRPSQNQIDDLLDEVDNRIKSGDRILVTTLTKRMAEELTKYMERLNIKVKYIHSEVKT
LDRVEILRELRLGIIDVLIGVNLLREGLDLPEVSLVAILDTDKEGFLRDQRSLIQTIGRA
ARNENGKVIMYADRMTGSMQRAIDETNRRRTVQMEYNQEHGITPKTIFKSKEAIMEQTSV
ADSNRTKEPKAYAGPDESLMSIAADPVVQYMKKDELEKVIKKTEKQMEAAAKELDFLQAA
KFRDELAELRKLLKNKRD
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggatttcaaattaacatcagaattcaaaccaaccggtgatcagccgaaagctataaaa
gaattagtgcgcggcatcagaacgggtgaacatgcccaagtactgctgggtgctactggt
acaggtaaaacctttaccgtggctaatgtgatacaggaggtgaaaaagcctacgctggtg
ctttgccataataaaaccttagctgcgcagctatacggggagtttaagcaattctttccg
gataacgcggtagagtactttatctcctactatgattactatcagcctgaggcctacata
gcttcttctgatgtgttcattgagaaagacctggctattaacgaggaaattgagaagctc
cgccttcattgtacctcagcgctactctctggtcgccgtgatgtgattgtggtggcttcg
gtgagctgtatctatggtattggtaacccagaggagttcgggaagaacgtaattccgttg
gcaccgggcatgaaagtgagccgcaacaacctgttgtaccagtttgtgtctattctttac
agccgcaccgaggtggagttcacacgtggaacgttccgggtgaaaggcgacacagtagat
atttttccagcgtacgctgattttgcttaccgcatctatttctggggcgacgagattgag
tctatccagcgcattgatcctcagtctgggaagaagatcgccgatgaagaaggaatttcc
ctgtttccggccaacctattcgtgaccggcaaagataccttgaaccaagccatcaacgaa
atccagtttgacatggtggcccagcacgagtacttcctgaaagaaggccgtgacggggaa
gccaaacgcattaaggaacgtaccgagtttgacttagagatgattcgggaactgggttac
tgctctggtattgagaactactcccgctactttgaccgccgggagcctggtgcccgtccg
ttctgcttattggattatttcccagatgatttcctgatggtaattgacgagagccacgca
accttgccacaggtacgtgctatgtggggtggtgaccgttcgcgtaaaactgcactggtg
gaatatggtttccggttaccggcggccatggacaaccgtccgcttacctttaatgagttt
gaaagcgtcatgcaccaggttatcttcgtgagcgccacacccggcgattacgagattcag
aaatcggaaggtgtggtggtggagcagatcatccgtccaaccggtcttcttgatcctgag
attgagatcaggcccagccagaaccagattgacgatttgctggacgaggtagacaaccgc
atcaaatccggcgaccgtattttggtgaccacgctcaccaagcgcatggccgaggaactg
accaagtacatggagcggcttaacattaaggtaaaatacatccactctgaggtgaaaacc
ctggatcgggtggagattcttcgcgaactgcgcctgggcattattgacgtcctgattggg
gtgaacttacttcgcgaggggctcgacttaccggaggtaagcttagtagccattttggat
accgacaaagaaggcttcctgcgtgaccaacgttctctgattcagactattggccgtgcc
gcccgtaacgagaacggaaaagtgatcatgtacgcagaccgaatgactggttctatgcag
cgtgccattgacgaaaccaaccgccgccgcacggtacagatggagtacaaccaggagcac
ggcattacgcctaaaaccatctttaagtccaaagaagccatcatggagcaaacctccgtg
gctgattccaatagaacgaaggagccgaaagcctatgctggtccggacgagagcctgatg
tctattgctgctgacccggtggtgcagtacatgaaaaaagatgagttggagaaagtcatc
aagaaaactgaaaagcagatggaagccgcggccaaggaactggacttcctgcaagctgcc
aagtttagagatgaattagctgagttgcgcaagctgctgaaaaacaagcgcgattag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (23)   

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