KEGG   Rufibacter tibetensis: DC20_21255
Entry
DC20_21255        CDS       T04099                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rti  Rufibacter tibetensis
Pathway
rti03030  DNA replication
rti03430  Mismatch repair
rti03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rti00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DC20_21255
   03430 Mismatch repair
    DC20_21255
   03440 Homologous recombination
    DC20_21255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rti03032]
    DC20_21255
   03400 DNA repair and recombination proteins [BR:rti03400]
    DC20_21255
Enzymes [BR:rti01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DC20_21255
DNA replication proteins [BR:rti03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DC20_21255
DNA repair and recombination proteins [BR:rti03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DC20_21255
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2
Other DBs
NCBI-ProteinID: ALJ01058
UniProt: A0A0P0CBL1
Position
5143746..5144567
AA seq 273 aa
MKLHLRKPIVFFDLETTGVDICRDRIVEISMLKVLPNGEEILKTTRVNPTIPIPIESSMI
HKIYDDDVADCPTFAKLARSLDDFLKGCDLGGFNLIKFDIPLLAEEFLRVDIDFDIENRS
IVDVCRIFHQMEQRTLSAAYKFYCNKPLENAHSAEADTIATYEILKSQVEMYEQVPLPGA
EDQAIYPVQNDMQALHKFTFQKTADLSGRIVYNSNGVEVFNFGKHKNVSVEDVLKKEPSY
YDWMMKGDFPLYTKKVLTRIKLRGALQQTAFKL
NT seq 822 nt   +upstreamnt  +downstreamnt
atgaaactacatctgcgcaaacccatcgtcttctttgacctggaaaccacgggagtggac
atctgccgcgaccgcatcgtggaaattagtatgttgaaggtgttgcccaacggggaggaa
atcctcaagaccacgcgcgtcaaccccaccatacctattcccattgaatccagcatgatc
cacaagatctacgacgatgacgtagccgactgccctactttcgcaaagctggcgcggtca
ctggatgattttctaaaaggctgcgacttgggcggtttcaacctcatcaagtttgacatc
cccttgctggccgaggagtttttgcgcgtagacattgactttgacattgaaaaccgctcc
attgtagacgtgtgccgcatcttccaccagatggagcagcgcaccctatcagcggcttac
aagttttactgcaacaaacccttggagaacgcccattccgccgaggctgacactattgcc
acctatgagattctgaagtcacaggtggaaatgtacgagcaggtgccgttgcctggagct
gaagaccaagccatttacccggtgcagaacgacatgcaggccttgcacaagttcactttc
cagaaaaccgctgatctttccggacgcattgtgtacaacagcaacggtgtggaggtcttt
aattttgggaagcacaagaatgtgtcagtagaggatgtgttgaagaaagagcccagctac
tatgactggatgatgaaaggtgacttcccgttgtacactaagaaggttttaaccagaatc
aaacttcgcggggctttgcagcaaacggctttcaaactataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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