KEGG   Ruminococcus torques: RTO_03410
Entry
RTO_03410         CDS       T02606                                 
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rto  Ruminococcus torques
Pathway
rto03030  DNA replication
rto03430  Mismatch repair
rto03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rto00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RTO_03410
   03430 Mismatch repair
    RTO_03410
   03440 Homologous recombination
    RTO_03410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rto03032]
    RTO_03410
   03400 DNA repair and recombination proteins [BR:rto03400]
    RTO_03410
Enzymes [BR:rto01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RTO_03410
DNA replication proteins [BR:rto03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RTO_03410
DNA repair and recombination proteins [BR:rto03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RTO_03410
SSDB
Motif
Pfam: RNase_T RNase_H_2 DEDDh_C DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: CBL25113
UniProt: D4M1K1
Position
complement(328120..328815)
AA seq 231 aa
MLKSYIAFDLETTGLSPQEHEIIEIGALKVREGKVVDRFMEFVHPDKPITPMITNITHIT
NDMVAGARSCPEVIHDFLSFCEDDVLIGHNVMFDYSFVKCSAVREGLTFEKMGIDTLKIA
RKVHKDFESKSLGALCDYYHIENPAAHRAYYDALATAKLYQTLAHYFEPQDPKVFQPLQL
QYKIKKVQPATPKQIALLERLTEQKELIPDWDTTTLTRSEASRIIDRLLKS
NT seq 696 nt   +upstreamnt  +downstreamnt
atgctgaaatcatatattgcatttgacctggagacaaccgggctaagtcctcaggaacat
gaaattatagagattggtgccctcaaagtccgggaaggaaaggtcgttgaccgttttatg
gaattcgtccatccagacaaaccgatcacaccgatgatcaccaacatcacacatatcaca
aatgatatggttgcaggagcaagatcctgcccggaagtcatccacgattttctctccttt
tgtgaagatgacgtgctgatcggacacaacgtcatgtttgactatagctttgtaaaatgc
agtgcagtcagagaaggtcttacatttgaaaaaatgggaatcgatactttaaaaattgcc
cgcaaagtacataaagactttgagtctaaaagtctcggtgcgttatgcgactattatcat
attgagaatcctgctgctcaccgcgcatactatgatgcactcgcaaccgcaaagctttat
cagacactggcacactattttgagccacaggatccgaaagtgttccagcctcttcaactt
caatataaaattaaaaaagtgcagcctgccacaccaaagcagattgcactcttagaacgt
ctgacggaacagaaagaactgatacctgactgggatacaactacgctgacaagaagcgaa
gcctcccggatcattgacagacttttgaaatcttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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