KEGG T02606: RTO

Ruminococcus torques: RTO_16040

Entry

RTO_16040         CDS       T02606

Name

(GenBank) 23S rRNA m(5)U-1939 methyltransferase

K03215

23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

Organism

rto Ruminococcus torques

Brite

KEGG Orthology (KO) [BR:rto00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rto03009]
    RTO_16040
Enzymes [BR:rto01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     RTO_16040
Ribosome biogenesis [BR:rto03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    RTO_16040

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_31 MTS N6_N4_Mtase Methyltransf_25 Cons_hypoth95 Methyltransf_15 Methyltransf_11 Met_10 Methyltransf_12 PrmA Methyltransf_32 UPF0020 PCMT Methyltransf_4 2-ph_phosp FtsJ Ubie_methyltran

Other DBs

NCBI-ProteinID:

CBL26196

UniProt:

D4M4N4

Position

1669364..1670734

AA seq 456 aa
MKKGQIYEGIIERVDFPNKGIVFVAEEEQYVTVKNGIPGQKIRFMINKFKRGNAEGRLLE
VLEKSPLETREPVCSIFPACGGCMYQTMPYEEQVKMKEGQIRRIMDPVVKGEYLFEGVKH
SPKEFHYRNKMEFSFGDEFKDGPLSLGLHKKGSTYDVLTAGDCQLVHEDMDKILLCVLNY
FKERNVSYYKKMQHVGYLRHLLLRRGDTTGEILVNLVTTTQEEYDLTPLVEELLALELEG
KIVGILHILNDSLSDVVKSDETRILYGQDFFYEKLLGLEFKITPFSFFQPNSKGAEVLYE
TVREYIGDIDNQVVFDLFSGTGTIGQVLAPVAKKVIGVEIIEEAVEAAKENAVRNGLYNC
KFIAGDVFKVLDEIEEKPDVIVLDPPRDGIHPKALPKILNYGVDKIVYISCKMTSLARDL
EMMQLAGYRVEKMTAVDQFCETVHVEVVCCLHRVNS

NT seq 1371 nt +upstreamnt +downstreamnt
atgaaaaaaggtcagatctacgaaggtattattgaacgtgtagatttcccaaacaagggg
attgtatttgttgcggaggaagaacagtatgttactgtgaaaaatgggattccgggacag
aagatccgttttatgataaataaatttaaaagaggaaatgcagaaggaagacttcttgaa
gtgttggagaaatctccattagagacaagagagccggtctgtagtatctttccggcctgt
ggtggctgtatgtatcagacgatgccatatgaagagcaggtgaagatgaaagaaggacag
atccgcagaatcatggatccggtagtaaagggcgagtatctttttgagggtgtgaagcac
agtccgaaggaattccattatcgtaataaaatggaattttcttttggagacgaattcaaa
gacggtccgttatctctcggtcttcataaaaaaggaagtacttatgatgtactgacagca
ggagactgtcagcttgtccatgaagatatggataagattcttctttgtgtgcttaattat
ttcaaagaaagaaatgtaagttattataagaaaatgcagcatgtcggttatctccgccat
cttcttttaagacgaggcgatacaacaggcgagattcttgtgaatcttgtaacgacaacg
caggaagaatatgatttaactccattagtagaagaacttttggcgttagaattagaaggt
aagattgttggaatccttcatatattgaatgattctctgtccgatgtcgtgaagagtgat
gagacaagaattctttatggacaggacttcttttacgagaagcttctcggattggaattc
aagatcacaccattttccttcttccagccaaactcaaaaggtgcagaagtgctgtacgag
actgtaagagaatacataggggatattgataatcaggttgtattcgatctgttcagcgga
acaggaacaattggtcaggtacttgctccggttgcgaagaaagtgatcggtgttgagatt
attgaagaagcagtcgaggcggcaaaagaaaatgctgtccgaaatggactttacaattgt
aaattcattgcaggtgatgtgtttaaagtgcttgatgagattgaagagaagccggatgtg
atcgtgctggatccgccgagagacggaatccatccgaaggcactcccgaagatcttgaat
tatggggtggataagattgtatatatttcctgtaagatgaccagtctggcacgtgatctg
gagatgatgcagctggcgggatatcgtgtggagaagatgacggcggtggatcaattctgc
gagacggttcatgtcgaagtcgtgtgttgtctacatcgggtgaattcgtag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (27)   

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