KEGG   Ruminococcus torques: RTO_17560
Entry
RTO_17560         CDS       T02606                                 
Name
(GenBank) Diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
rto  Ruminococcus torques
Pathway
rto00300  Lysine biosynthesis
rto00470  D-Amino acid metabolism
rto01100  Metabolic pathways
rto01110  Biosynthesis of secondary metabolites
rto01120  Microbial metabolism in diverse environments
rto01230  Biosynthesis of amino acids
Module
rto_M00526  Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rto00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RTO_17560
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RTO_17560
Enzymes [BR:rto01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     RTO_17560
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: CBL26322
UniProt: D4M510
Position
1836716..1837987
AA seq 423 aa
MSKKPFVTKEQVEEIVKTYPTPFHLYDEKGIRENAKALKEAFAWNPGYKEYFAVKATPNP
FLLQILKEYGCGCDCSSYTELLMSDAVGIDGHDIMFSSNDTPEEDFKLADKLGAIINLDD
ITHIDFLEKTIGHIPETISCRYNPGGIFKISNDIMDNPGDSKYGMTTEQITEAFKTLKAK
GAKEFGIHAFLASNTVTNDYYPMLAKVLFEQAVRLQKETGVHIKFINLSGGIGIPYTPDQ
EPNDIRVIGEGVRKVYEEVLVPAGMGDVAIYTELGRFMMGPYGCLVTKAIHEKNTYKNYI
GVDACAVNLMRPAMYGAYHHITVLGKEDAPCDHKYDVTGSLCENNDKFAIDRMLPEVDMG
DYLVIHDTGAHGFSMGYNYNGKLKSAELLLKEDGSVQMIRRAETPKDYFATFDCFEVGKK
LCK
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgagtaagaaaccatttgtgacaaaagaacaggttgaagagattgtaaaaacatatccg
actccgttccatctttatgatgagaaaggaatccgcgagaatgcaaaagcattaaaggaa
gcatttgcatggaatccgggatataaagagtattttgctgtaaaggcaactccgaatccg
ttccttttacagatcttgaaagagtatggatgcggttgtgactgctcctcttatacagaa
ctgcttatgtcagatgcagttggaattgatggtcatgatattatgttttcctctaatgat
acaccagaggaagattttaaacttgctgataaacttggagcaatcatcaatctggatgat
attacacatattgacttccttgagaagacaatcggacatattccggagacaatcagctgc
cgttataatccgggcggaatattcaagatcagtaatgatattatggataatccgggagat
tcaaagtatggaatgacaacagagcagatcacagaagcatttaagacactgaaagcaaaa
ggtgcaaaagaattcggtattcatgcattccttgccagcaatacagtgacaaatgattat
tatccaatgcttgcaaaagttctttttgaacaggcagtacgtcttcagaaagaaacagga
gtacatattaagtttattaatctttctggtggtattggaattccttacacaccggatcag
gaaccgaatgatatccgtgtgatcggagagggtgtccgcaaggtttatgaagaagtactt
gttccggcaggaatgggagatgttgcaatctacacagagcttggtcgttttatgatggga
ccttatggctgccttgtaacaaaagcaatccatgagaagaatacttataagaactacatc
ggagtagatgcatgtgctgttaacctgatgcgcccggcaatgtacggagcatatcatcac
attactgttcttggaaaagaagacgcaccgtgcgaccacaaatatgatgtaacaggttct
ctgtgtgaaaataatgataagtttgcaattgacagaatgcttccggaagttgatatggga
gattaccttgtaatccatgatacgggtgcacatggtttctctatgggatataactacaat
ggtaaattaaaatcagcggagctgctcctgaaagaagatggaagtgtacagatgattcgc
cgtgcggagacaccgaaagactattttgcaacatttgattgttttgaggttggaaagaaa
ctttgcaaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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