KEGG   Ruminococcus torques: RTO_20340
Entry
RTO_20340         CDS       T02606                                 
Name
(GenBank) Holliday junction DNA helicase, RuvB subunit
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
rto  Ruminococcus torques
Pathway
rto03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rto00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    RTO_20340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rto03400]
    RTO_20340
Enzymes [BR:rto01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RTO_20340
DNA repair and recombination proteins [BR:rto03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     RTO_20340
    RecFOR pathway proteins
     RTO_20340
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA Mg_chelatase AAA_5 RNA_helicase TIP49 AAA_3 Bac_DnaA AAA_16 nSTAND3 MCM TsaE DUF815 NB-ARC Sigma54_activ_2 AAA_18 AAA_2 AAA_17 Resolvase AAA_28 IstB_IS21 AAA_14 AAA_24 Parvo_NS1
Other DBs
NCBI-ProteinID: CBL26566
UniProt: D4M5Q4
Position
2113285..2114283
AA seq 332 aa
MAKRIITTENLEEDSKIEGQLRPQLLSEYIGQEKAKKTLSIYIEAAKARGEALDHVLFYG
PPGLGKTTLAGIIANEMGVNMKITSGPAIEKPGEMAAILNGLQEHDVLFVDEIHRLNRQV
EEVLYPAMEDYAIDIMIGKGPGARSVRLNLPKFTLVGATTRAGMLTAPLRDRFGVVHHLE
LYNEEELKTIILRSAHVLGVEIEEEGAMELARRSRGTPRLANRLLKRVRDFAQVKYDGVI
TKEVANYALDLLDVDKFGLDHIDRNILITMIEKFQGGPVGLETLAASISEDAGTLEDVYE
PYLLKNGFIQRTPRGRVVTELAYQHLGIPREV
NT seq 999 nt   +upstreamnt  +downstreamnt
atggcgaagagaattataacgacagagaatctggaagaagacagtaagatagaggggcag
ttaagaccgcagcttttatcagaatatatcggacaggagaaagcaaagaagacacttagt
atttacatagaagcagcgaaagcaaggggcgaagcactggatcatgtgttgttttacgga
ccgccgggacttggtaagacaacactggcgggaatcatagcgaatgagatgggtgtaaat
atgaagattacctccggaccggcaatagagaaaccaggtgagatggctgcaattctgaat
ggtcttcaggaacatgatgtgttatttgtggatgagattcacagacttaaccgtcaggtg
gaagaagtgctttatccggcaatggaagattatgcgatcgacattatgatcggaaaggga
ccgggagcaaggtctgttcgtctgaatcttccaaagtttacactggttggggcaacaaca
agagcaggaatgcttacagcaccgctcagagaccgttttggtgtagtacatcatttggag
ttatataatgaagaagagttgaagacgatcattctgcgttctgcacatgttctgggtgta
gagattgaagaagaaggtgctatggaacttgccagaagatcaaggggaacaccgcgactt
gcgaaccgtctgctgaaaagagtgcgtgactttgcacaggttaaatatgatggtgtaatc
acaaaagaagtagcaaattatgcattggatcttcttgacgtggataaattcggattagat
catattgatcgtaacattctgatcacaatgattgagaagttccagggaggaccggtagga
cttgagacacttgccgcatcgatttcagaagatgcaggcacattagaagatgtttacgaa
ccgtatttgttgaaaaatggattcattcagaggactccaagaggtcgtgttgtaacagaa
ttagcttaccaacatcttggaattccgagagaagtatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (26)   
   Pfam (26)   
All databases (36)   

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