KEGG   Rhincodon typus (whale shark): 109910535
Entry
109910535         CDS       T06055                                 
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
Organism
rtp  Rhincodon typus (whale shark)
SSDB
Motif
Pfam: FCP1_C NIF PTCB-BRCT BRCT RTT107_BRCT_5
Other DBs
NCBI-GeneID: 109910535
NCBI-ProteinID: XP_048451721
Position
4:41147246..41440256
AA seq 1035 aa
MAALAEAGEPDRDQEQDQEQNRDGSAAGAATTAGNAAAATRAVLEVAVPGSRPLRLLEWS
VKVGWPVQIGTVLAHCLPVEQESDAERERPRSRPQEKRVKSDRAGVVKELCWQPGQVVPS
GSVLVRLEGCSHSIVMKGLCAACGQDLTQLQKKNGKQMVPLSTATVSMIHSVPELMVSSE
QAEQLGREDQQWLHKNRKLVLMVDLDQTLIHTTEQLCQKMSNKGIFHFQLGRGEPMLHTR
LRPHCREFLEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPYSKT
GNLRNLFPCGDSMVCIIDDREDVWKFAPNLIAVKKYTYFQGTGDINAPPGSRDVQTKKRV
NHSTKPAESSEHLASVSVDAASTIDGASAESEATERSNGLGECSKKQNGSSSVLNEEPSQ
CAESLKCGPSVRESCDKANERKSLCDANDSRTKTAELDASVKVDELDHSLECGVRLAESN
VEQCGKEAESHLTQVSSELDFDLSSDSDSDSQEGKRDTTSPSPTSSLDAEKEQKSSTEVK
SRKPRKDGPVSAKAKLNHSDKEKAGDLPGCDSQDKSTDPGPEGDDDQDSLGDVGNGCTDK
KEAETESQNSEQSGVTMGESLDQSMDVEEEDQDEDDHLMYLETILVHVHTEYFAQYEKYL
KKERQVPDLRKIVPELKSKALEGTTIIFSGLYPTNYPIEKTREWYHATALGAKVKKTLCL
NPKDPNRTTHLIAARPGTEKVRQAQACKHLHVVNPDWLWSSLERWERVDEKLFPLKEDYI
KTQRANSPASFPEVQGSFQTPLFHPTPIHPKPQPGPEVRTYDPNTGKLIRKDSQGNRQSM
CIQPPAAPVTLSVHGEQSSFRVVQPHQHQVLDEDELPNSSQSEEKPGPSRAGARKRQPSM
SETMPLYTLCKEDLESMDKEVDDILGEDSDNESENEKEEKMEEQRVQPQEEALQQDQQTV
QIGETENQKPEIETRPKSSSSEESLTGRVPRGHKRKLEDDGVGSDSSKLSSNEDDSSSEA
DEMAAALEAELNDFI
NT seq 3108 nt   +upstreamnt  +downstreamnt
atggcggcgttggcggaggcgggggagccggaccgggaccaggagcaagaccaagagcag
aaccgggatggatcggcggctggcgctgcaacgacagccggcaacgcagcagctgcaacc
cgggccgtgctggaagtggcagtcccgggctcccgacctttgcggcttctggagtggagt
gtgaaggtgggctggccggtgcagatcggcacggtgctggctcactgcctgcccgtggag
caagagagcgacgccgaacgcgaaaggccccggtctcggccccaggaaaagcgggtgaag
tcggaccgggccggagtggtcaaggagctgtgctggcaaccgggccaagtggtgcccagt
ggaagtgtgctggttcgacttgaaggatgcagtcactcaattgttatgaaaggcctctgt
gcagcctgtggtcaagacttgacacaattgcagaagaagaatgggaagcaaatggtgccc
ctatccacagccactgtttctatgattcacagtgtcccagagctgatggtcagctctgaa
caagccgaacagttgggtcgagaggatcagcaatggttacacaaaaaccggaaattagtt
ttgatggtggatctggaccagactttaatccacacgacggagcagttgtgccaaaagatg
tccaataagggaatattccatttccaactggggcggggagagccaatgctacacactcga
ctacgacctcactgtagagaatttctggaaaaaatagcaaaactgtacgagttgcacgtg
ttcacctttggcagtaggctctacgcacacacaattgcaggatttctggatccagaaaag
aagcttttctcacaccggattttatcaagggatgaatgtattgatccgtattctaaaact
ggaaatctacgaaacctctttccatgcggtgactcaatggtatgcatcattgacgatcgt
gaagatgtttggaagttcgcaccaaatctaatagccgtgaaaaaatacacctactttcaa
gggactggggatatcaatgcaccgccaggatcaagggatgttcagacaaaaaagagggta
aaccattccacaaagcctgcagagagctcggaacatttggcatccgtttccgttgacgct
gctagcacgattgacggggccagtgcagagtctgaggcaacagagcggagtaatggtctt
ggagagtgttcgaagaaacaaaatggtagcagtagtgttcttaatgaagaaccttcgcaa
tgtgctgaatctctaaagtgcggtcctagcgtcagggaatcatgcgacaaagcaaacgag
aggaaatctttatgcgatgccaatgactctcgcaccaaaactgctgaacttgacgcttct
gtgaaagtggatgaattggaccactcacttgagtgcggtgttaggttggcagaaagtaat
gtggagcaatgtggcaaggaagccgaaagtcacttaactcaggttagtagcgagcttgat
tttgatttgtcgagcgacagtgacagcgactcgcaggagggcaaaagagacaccacgtca
ccgtcgccgacctcgagtttagatgctgaaaaggagcagaagagttcgactgaggtgaaa
tccaggaaaccgaggaaagatggacctgtgtcggccaaagcaaaactgaaccactcggac
aaggaaaaggcaggtgatctaccggggtgtgattcacaggataaaagcactgatccaggt
cctgagggcgatgacgatcaggactcgctgggtgatgtcggaaatggctgcaccgataag
aaagaggctgaaaccgagtctcagaatagtgaacagtctggagttacaatgggtgagtct
ctggaccagagcatggatgtggaagaggaggaccaagatgaggatgaccacttgatgtac
ttggaaacaatcctggtccatgtccacacagagtattttgcccagtatgagaagtacctc
aaaaaggagagacaagtgcctgacctgcgaaagattgttccggaactgaagagcaaggca
ctcgaaggcacaacgataatattcagtggactctaccctacaaactaccccatagaaaag
acaagagagtggtatcatgccactgcacttggagccaaggttaaaaaaaccttgtgttta
aatcccaaagaccccaacaggacaactcacttaattgcagctcgacccggaacagaaaag
gttcggcaagcgcaagcatgtaaacatctccatgtagtcaatccagactggttatggagc
tctctagaacgatgggaaagggttgacgaaaagttgttcccattgaaagaagactacatc
aaaacccaaagagccaacagtcctgccagtttccctgaagttcaaggtagtttccaaaca
ccattgtttcatccaactcccattcatccgaaacctcagccaggacccgaagtccgtact
tacgatcccaacacaggaaaactcatccgaaaagattctcagggaaacagacaatccatg
tgtatccagcctccagctgcaccagttacattatctgttcacggagaacagtcatcattc
agagttgtgcagcctcaccagcatcaggtgttagatgaagatgaactgcctaactccagt
cagagtgaagagaagcctggcccatcacgagctggggccaggaaacgtcagccgagcatg
tctgagacaatgcccctctacacgctctgtaaggaggatttggagagcatggacaaagag
gtggacgatatcttgggtgaagacagtgataatgaaagtgagaatgagaaagaagagaag
atggaggagcagcgtgtacagccacaggaggaagcactgcagcaagatcagcagacagtg
caaattggtgaaactgaaaatcagaagcctgaaatagaaacaagacctaaatcatcctcg
agtgaagaaagcttaacgggcagagttcccagggggcacaagcgaaagttggaagacgac
ggagtgggcagcgattccagtaagctgtccagcaacgaagatgacagcagctcagaggcc
gacgagatggcagcagcactagaagctgagctgaacgatttcatctga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

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