KEGG   Rhincodon typus (whale shark): 109920871
Entry
109920871         CDS       T06055                                 
Name
(RefSeq) ras-related protein ORAB-1
  KO
K07874  Ras-related protein Rab-1A
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    109920871
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rtp04131]
    109920871
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtp04147]
    109920871
   04031 GTP-binding proteins [BR:rtp04031]
    109920871
Membrane trafficking [BR:rtp04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    109920871
 Autophagy
  Other autophagy associated proteins
    109920871
Exosome [BR:rtp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109920871
  Exosomal proteins of other body fluids (saliva and urine)
   109920871
  Exosomal proteins of colorectal cancer cells
   109920871
GTP-binding proteins [BR:rtp04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    109920871
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA SRPRB FeoB_N AAA AAA_29 AAA_7 PduV-EutP ABC_tran LANC_like AAA_16 Septin AAA_22 AAA_5 TniB CRAL_TRIO_2
Other DBs
NCBI-GeneID: 109920871
NCBI-ProteinID: XP_048456842
Position
9:complement(2077800..2095497)
AA seq 227 aa
MTYTQRWKSQITAKLKEILLTNKAMFEFKDDYLFKLLLIGDSGVGKSCLLLRFADDTYTE
SYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQES
FNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNA
TNVEQAFMTMAAEIKKRMGPGATSGGSEKSNVNIQSTPVKPSSGGCC
NT seq 684 nt   +upstreamnt  +downstreamnt
atgacctatacccagaggtggaaaagtcagatcactgctaagcttaaagagatccttttg
acgaataaagctatgtttgagttcaaggatgactatttattcaagctgctgctgattgga
gactctggtgttggaaaatcttgtctcctccttagatttgcagatgatacgtacacagag
agttatatcagtacaattggtgtggacttcaaaatcagaactatagagttagacggcaag
actatcaaacttcaaatttgggacacagctggtcaggaaaggtttcgaacaatcacgtcc
agttattacagaggagcacatggcatcatagtcgtatatgatgttacagatcaggagtca
ttcaacaatgtaaaacagtggctccaggagatagatcgttatgccagcgaaaatgttaac
aagttattggtagggaacaaatgtgacctgacaacaaagaaagtagtggactatacaaca
gcaaaggaatttgcagactcccttgggattccatttttggaaaccagtgcaaagaatgca
acaaatgtagaacaagccttcatgacaatggccgctgagattaaaaagcgaatgggtcct
ggagctacatctggtggctctgaaaagtccaatgtaaacatccagagcacaccagtgaag
ccgtccagtgggggttgctgctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (21)   
   Pfam (21)   
All databases (32)   

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