KEGG   Rhincodon typus (whale shark): 109923597
Entry
109923597         CDS       T06055                                 
Symbol
atg2a
Name
(RefSeq) autophagy-related protein 2 homolog A
Organism
rtp  Rhincodon typus (whale shark)
SSDB
Motif
Pfam: ATG2-VPS13_C VPS13_DH-like BLTP1_C
Other DBs
NCBI-GeneID: 109923597
NCBI-ProteinID: XP_048475573
Position
43:5050810..5151608
AA seq 1781 aa
MSWFFPWSSSIKKRACRYLLQHYLGHLLEERLTLEQLSLDLYNGSGRLREVQLDVWSLNE
FLDSVGAPLEITDGFISSISVIIPWSALITENCTVEVTGLQVTCRPKYHFVPGTESPSWS
SCMTTSMQLAKECLKEQAEEPEEPTQPLEGLEMFAQTIETVLRRIKVTFLDTIVRVEHTP
DGSRTGIALEVHIKRLEYCDEAVKDSGGVSKRDPIPIDIHQPPAFVHKVLQFSGVLLHYE
AIPEQGGELQTSPPVLPQQVDAPASSAAESQSFPGASSRTAEGSAPSSPSPLVQIGSCTG
CMELTVKFKQNDVLPGPKLAIDGKMGSLHLFLNPQQISNLADLFSTLNLTAEVNRLKEKL
SKSRPLDPEDFKLIEQDLNKQLHSGQSSGHAKSEELDSFAGTENGVPTEMFYSMAPMTSS
VASVQSVSELSDVDLESSMRSDYNSCPLQPPSLQACLLMNSPHRYGSPVFPNMLPSLQSM
NKQQGKSQPSPSLDNVKAELLLRLTIGGMTATLLHLDPLLGQSPASQDPISGTGTYFQTA
ACRYFTELAYFKDSIFGGRGFDHLRSQFEKACPHNNLRLTGGAVQLTSEQKAGGGAQLLS
TDICFGTLEILECLWSPVGPGAEQQAAGYTELLLFEKVSPLACGSSASPCAQIHYRQTQR
TTGKGSHRKVSRSAELLIELQEAHVDIDLGFLDRVDFLLRPHPVGGQEFQTAQRRPSEQV
LIPGISALCAEPPPVLGQPTSVRLTAPRAHLRLQFPVPDLRPEPERTPWFQKAVRRETLR
LEFTDLCCRTELGATSRTEPVKYEASFTDLHGVYEDGVNPGVSCIRVSKTPDKTVAGRKY
IIPKIVLTVNPDCSGSEWDLIMEKTDDMDLSAVESPCELKQPEPSPFSSKRTMYETEEMV
IPGDPEEMAQFQSQTLATSQYVLELTLPALHLLFPSKEFYESIYNRINNDLLMWVPAAPS
PSNMAQGEGTAGLHPLLPGCTPFAQDNFRLCKSAFRLDSDSEDEDSHFYSLEENGRRRKA
EAKRSRVLSFLSAVVNIGKGRVTALTDLKGEGEKPVTGVHGELVLDVESGTIFTVSQYKG
QPDLSYLCIESSKVALYQKAEVEDYFLPERLDVLSFTAPVGLDPTILCSEEGLATKLSAA
AGRKDRSPPMLSAAIKITLDTVRSIKEFLVALRLQGATLCHRMALTNQSWHEQLMDFFDV
LDDPILGYTPPTVITVLHTHLVSCAVDYSCRFILDDSAVYLCNRCNTETVDLKKDYVCVL
DVDLLELVITTWKGDSGGKLAQPLFELRCSNNVVHVHTCADSCATLVNLVQYVVNSGDLH
PPPKQDSPTEIAGQKLQVQDQDRVILHLGLCLLLLSQDTPSKLWSSLALSLCHYKASKFE
GSRTPPPTLTIKALHVRPECGLGGPECCLRVSLMPLRLNIDQDALFFLKGFFTSFATGIN
PIVPVETAMEAKPELSQRASGAPDSDSIGRDTEPSQCLPEMTASMETTCSEQSSSSTASS
SSEQPIYFREFRFTSEVPIWLDYHGKHVTMDQGTFAGILIGLAQLNCSELKLKRLCCRHG
LLGVDKVINYALNEWLNDIRKNQLPGILGGVGPMHSVVQLFHGLRDLFWLPIEQYRKDGR
IIRGLQRGAASFGTSTASAALELSNRLVQAIQATAETVYDILSPTPPVTKAVMDKRYLKK
YKRVQQPADLREGVAKAYDTVREGVIDTAQTICDVAARGHEQKGITGAVGGVLRQIPPTV
VKPLIVATEATSNLLGGMRNQIKPDARKEDSLKWRTDEGQD
NT seq 5346 nt   +upstreamnt  +downstreamnt
atgtcatggtttttcccctggtcgagctcgatcaagaagcgggcctgccgttacctgctg
cagcactacctgggccacttgttggaggagaggctgactctggagcaactgagcctggac
ctatacaacggcagcgggcgcctcagagaggtccagctcgacgtctggtctctgaatgaa
ttcctggactcggtgggggcgccgctggagattacagatggcttcatcagcagcatctcg
gtgatcatcccctggtcggctctgattacggagaactgcaccgtggaggtgacaggtctg
caggtgacatgcaggcccaagtaccactttgtcccagggaccgagtctcccagctggtcg
tcgtgtatgactaccagcatgcagctcgccaaggagtgcctgaaagaacaggctgaagag
ccggaggaacccacacagccactcgagggtcttgagatgtttgcacagaccattgaaact
gtgctcaggaggataaaagtaacattccttgacaccattgttcgagtggaacacactcca
gatggatccaggacaggcattgccctggaagtgcacattaaaaggttggagtactgtgat
gaagctgtgaaggactcgggcggcgtctcgaagagggaccccattcccatcgacattcat
cagccccctgcattcgtccacaaggtgctgcagttttctggggtattgttgcactacgag
gcaatccctgagcagggcggggagctccagacctcaccacctgtactgccgcagcaagtg
gatgcacctgcctcctccgctgcagaatcgcaatctttccctggagcaagcagcaggact
gcagagggaagcgccccatcatcaccttcgccgctggtgcagatcggcagttgtacaggg
tgcatggagttgaccgtaaaattcaagcagaacgacgtgctgcctgggcctaagttggca
atagatgggaagatggggtcactgcacctgttcctgaacccacaacagatctccaacctg
gctgacttattcagtacacttaacctcacagcagaagtgaacagactgaaggagaagctg
agcaagagtcggccactggaccccgaggatttcaaactgattgagcaggatctcaacaag
cagcttcactcgggccagagttcggggcacgccaagagcgaagagctggactcgtttgca
ggcacagagaatggggtacccacagagatgttttactccatggctcctatgaccagcagt
gtggcctcagtgcagtcggtgagtgagctgtcagatgtcgacctggagagctccatgcgc
agtgattacaatagctgccctctgcagcccccgtcattgcaagcatgtctgctgatgaac
agtccgcaccgctatgggagccctgtgttccccaacatgctccccagtttacagtccatg
aacaaacaacaaggtaaatctcagccatccccatccctggacaatgtgaaggctgagctg
ctgctaaggctgactatcggtgggatgactgccacactgctgcacctagatccgctgctt
ggacaatctcctgcatcgcaggaccccatatccggaacagggacctatttccaaactgct
gcctgccgttactttaccgagctggcatacttcaaggacagcatctttggggggagaggc
tttgaccacctgagaagccagttcgagaaggcctgcccccacaataacttgaggctgaca
ggtggcgcggtgcagctgacgagtgagcagaaggcaggcggtggggcgcagcttctgagt
acggacatatgcttcggcacactggagatcctggaatgcctgtggagcccagtgggacct
ggagctgagcagcaggctgctggatatacagagctgttgctgtttgagaaggtgtccccc
ttggcttgcgggtccagtgccagtccctgcgctcagattcattacagacagacccagagg
acaacaggcaagggcagccacaggaaggtgtcgcgcagcgccgagctgctcatcgagctc
caagaggcacacgtggatatcgaccttggcttcctggatagggtggacttcctacttagg
ccccatccggtggggggtcaggaattccagacagcgcagaggagaccgtcggagcaagta
ctgattccagggatctctgcgctctgtgccgagccgcctcctgtgctggggcagccgacc
tcggtgcgcctcacagcccccagagcccacctgcggctgcagttccccgtacccgatctg
cgacccgagcccgagcgcacaccctggttccagaaggccgtgcgcagggagaccctgcgg
ctggagttcactgacctgtgctgcagaaccgaactcggagccacttccagaaccgagccc
gtcaaatatgaagccagcttcaccgatctacatggtgtatacgaagatggagtcaaccct
ggcgtctcttgcatccgagtctcaaaaacacctgacaagactgttgctgggagaaagtac
atcatcccaaagattgtgctgacggtgaacccagactgcagtggctctgagtgggacctg
atcatggagaaaacggatgacatggacctgtcagctgtcgagagcccctgtgaactgaag
cagcccgaaccatcaccgttctcatccaaacgcaccatgtatgagaccgaggagatggtg
atcccgggagatccggaagagatggcacaattccaatcccagaccctggcaacgtcccag
tacgtgctggagttgaccctgcctgccctgcacctactgtttcccagcaaggaattctac
gagagtatctacaacagaatcaacaatgaccttctgatgtgggtgccggccgcaccctcg
cccagcaacatggcacagggcgagggcaccgcagggctgcaccctctcttgccgggctgc
acccccttcgcacaggacaacttccgcctctgcaagtcagccttcagactggactctgac
tccgaagatgaagattcccacttctactcgcttgaagagaatgggaggaggaggaaggca
gaagccaagaggagcagagtgctgagcttcctttcagctgtcgtgaacatcggaaaaggc
agggtcacagctctgactgacttgaagggcgaaggggagaagccagtcactggggtgcac
ggggagctggtccttgatgtggagagtggcaccatcttcactgtatcgcagtacaaggga
cagcctgacctcagctacctctgcattgagtccagcaaagtagccctataccagaaagcc
gaggttgaggattacttcctgccggaacgactggacgtgctgagcttcactgcccccgtg
ggcctggatcccaccatcctgtgctcggaggagggactggccactaagctctcggcagct
gctgggcggaaggacaggagcccgcccatgctctctgcggccatcaagatcacactggac
actgtgaggagcatcaaggagttcctagttgccctcagactacaaggtgccaccctgtgc
caccgaatggccttaactaaccagagctggcacgagcagctgatggatttcttcgatgtg
ttggatgacccgattctgggctacacccctcctacggtgatcacagtcctgcacactcac
ctggtcagctgcgctgtcgattacagctgcaggtttattctggatgattctgctgtctat
ctgtgtaacagatgcaacacggagaccgtggacttgaagaaagactacgtgtgtgtgctg
gacgtggatctgctggagctggtgatcaccacctggaaaggagactctggtggaaagctg
gcacagccgctgtttgagctgcgttgctccaacaatgtggtgcatgtccacacttgcgct
gactcgtgtgccaccctggtgaacctggtacagtacgtggtgaacagcggagacctccac
cctccgcccaagcaagacagcccgactgagatcgctgggcaaaaactgcaggtacaagac
caagaccgcgttatcctccacctcggcctgtgtttgctgctcctgtctcaggatactccc
agcaaactttggtcatctctagccctctcgctttgtcattacaaggcctcaaaattcgag
ggttcaaggacccctcctccaactctgacaatcaaggccctccacgtgcggcccgagtgt
ggacttggtggtcccgaatgctgcctccgagtctccctcatgccactacgcctcaacatt
gaccaggatgccttattcttcctgaagggtttcttcacgagctttgcgaccggaatcaat
cccattgttcccgttgaaacggcgatggaagccaagcctgagctcagccagagggcgagc
ggagccccggactctgattccatcggccgcgacactgagcccagtcagtgcttaccagag
atgaccgcttcgatggagacaacctgcagcgagcagagctcctcgtccactgcctcctcg
tcctccgagcagccaatctatttcagggaatttcgatttacctcagaagtaccaatctgg
ttggactatcatggaaagcatgtaaccatggatcaaggtacgttcgctgggatactcata
ggactcgcccagctcaactgctctgaactgaagctgaagaggctatgctgtagacatggt
ctgctaggggtggacaaggtgatcaactatgccttgaacgagtggctgaacgacatcagg
aagaaccagctcccgggcattcttgggggcgtaggccccatgcattctgtggtacagctg
tttcacggcctcagggatctcttctggctgccaattgaacagtaccggaaggatgggcgg
attatccgggggctgcagcgaggagctgcgtctttcgggacctccaccgcgtccgcagct
ttggaactgagcaaccgtctggtgcaggccattcaggccacagcagagactgtttacgac
atcctgtcgccaacaccccccgttaccaaggcggtcatggacaagaggtacctgaagaag
tacaagagggtacagcagcctgctgacctgcgtgagggagttgccaaagcttacgacact
gtccgagagggggtcatcgacacggcgcagaccatctgcgacgtggccgcccggggtcac
gagcagaaaggcatcacgggggctgtggggggggtcctgaggcaaatcccgcccactgtg
gtcaagccgctgattgtggccacggaggccacctccaacctcctcggggggatgcggaac
cagatcaagccagacgcccgcaaggaggacagcctgaagtggcgcacagatgaaggtcag
gactag

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (8)   

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