KEGG   Rhincodon typus (whale shark): 109926989
Entry
109926989         CDS       T06055                                 
Symbol
extl3
Name
(RefSeq) exostosin-like 3
  KO
K02370  alpha-1,4-N-acetylglucosaminyltransferase EXTL3 [EC:2.4.1.223 2.4.1.224]
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp00534  Glycosaminoglycan biosynthesis - heparan sulfate / heparin
rtp01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
    109926989 (extl3)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:rtp01003]
    109926989 (extl3)
Enzymes [BR:rtp01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.223  glucuronosyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
     109926989 (extl3)
    2.4.1.224  glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
     109926989 (extl3)
Glycosyltransferases [BR:rtp01003]
 Glycan extension
  O-Glycan
   109926989 (extl3)
SSDB
Motif
Pfam: Glyco_transf_64 Exostosin ADIP TPR_MLP1_2 MscS_porin THOC7 DUF1664 Seryl_tRNA_N TBK1_CCD1 EXOC6_Sec15_N RasGAP_C CCDC22_CC CENP-H
Other DBs
NCBI-GeneID: 109926989
NCBI-ProteinID: XP_020382467
Position
5:87144962..87275802
AA seq 914 aa
MLRNGVVGNVGQPCMLRWSNRIRLTWLSFTLFIILVFFPLIAHYYLTTIDNLDDSGPRIF
EPRSGNALCEVKHVQDLCRIRESVSEELLQLEAKRQELNSEIAKLNLKIESCKKSIENAK
QDLLQLKNVISQTEHSYKELVAQNQPKLSLPIRLLPEKDETNFPLPKSPNSCRLHSCFDY
SRCPLTSGFPVYIYPLDQYQFSALIDPLIKQAFLATARTNTYITNNPHVACVYVVLIGEL
QGPTVLKSTDLEKQLHSLPYWRSDGHNHLLINLSRRSQTQNMLYNVSTGRAMVAQSTFYD
MQYRPGFDLIPSPLIHAMSEPNFLEIPPQVPVKRKYLFSFQGEKIESLMSSLQEARSFEE
EIEGNAPADYDDRIIATLKAVQDSKLDLVLVEFTCKNQPQPALPTEWALCGERDDRLELL
KLSTFVLIITPGNSHLIASTGCSMRLFEALEVGAIPVILGEHVQLPYHDTIHWSEAALVV
PKPRITEVHFLLRSISDSDLLNMRHQGRFLWETYFSSSDNVLSAILSTMRTRIQIPAAPI
PEEPSKEIPHKTGKTAGTDPNMADTGDLDLGPVETEPPYASPKYLRNFTVTIRDTYRAWN
TAPGPFHLFPHTPVDPTLPSEAKFLGSGTGFRPIGAGAGGSGKEFQAALGGNVPREQFTV
VMLTYEREEVLMNSLERLNGLPYLNKVVVVWNSPKPPSEDLIWPDIGVPIVVVRTEKNSL
NNRFLPWDTIETEAILSIDDDAHLRHDEIMFGFRVWREARDRIVGFPGRYHAWDMTHQSW
LYNSNYSCELSMVLTGAAFFHKYYAYLYSYIMPQAIRDMVDEYINCEDIAMNFLVSHITR
KPPIKVTSRWTFRCPGCPQALSHDDSHFHERHKCINFFVKVYGYMPLLYTQFRVDSVLFK
TRLPHDKTKCFKFI
NT seq 2745 nt   +upstreamnt  +downstreamnt
atgctccggaacggagttgttgggaatgtagggcagccgtgcatgctacgatggtccaat
cgcatccggttgacctggctcagtttcaccctcttcatcatactggtgttcttcccgctg
attgcccattactacctgaccaccatcgacaacctcgatgactccggccctcgcattttt
gagccacgctcaggcaatgccctgtgtgaggtcaagcacgtgcaagatctgtgtcgcatt
cgggaatcagtcagcgaggaactgctgcagcttgaggcgaagcggcaggagctcaacagc
gaaattgccaaactcaacctgaagattgagtcctgcaagaagagcattgagaatgccaag
caggacctgctgcagctcaaaaatgtcatcagccaaactgagcactcgtacaaggaactg
gtggcacagaaccagccaaagctctcgctgccaatccgcttgttgccagagaaagacgag
actaacttcccattgccaaagtcccccaacagttgccgcttgcactcttgctttgattac
tcccggtgtccgcttacatcaggatttcctgtttacatctacccactggatcagtaccaa
ttcagtgctttaattgatccattaatcaaacaggcatttctggcaactgctcgaactaac
acctacattacaaacaatcctcatgttgcttgtgtctatgtggtcttgattggggagctg
cagggccctacagtactgaaatctactgaccttgaaaagcagttgcactccctcccttat
tggcggtcagatgggcacaatcatcttctcatcaacctgtctaggagatcccagacacag
aacatgctctacaatgtcagcacaggcagggctatggttgcccagtctacattctatgat
atgcagtatcgtcctggctttgatcttatcccctcgccactcatccatgccatgtccgaa
cctaacttcttggagatacctccccaggttccagtcaaaagaaagtatctcttcagtttt
cagggcgaaaagatcgagtcactcatgtccagcttgcaggaagcccgttcctttgaggag
gagattgagggaaatgctccagccgattacgatgataggatcattgctaccttgaaggct
gtccaggacagtaagttagacttggttcttgtagagttcacctgcaaaaaccaacctcag
cctgccttgcctacggagtgggcactttgtggagagagggatgacaggttagaattgctg
aaactttccacttttgtattaattataacaccaggcaatagccatctcattgcttccact
ggctgttccatgaggctttttgaagccttggaagttggagccatcccagtaatccttggg
gaacatgtgcagttgccgtatcatgacacgatacattggagtgaggcagctctagtggtg
ccaaagcctcgcataacggaagttcacttcctcctgaggagcatctctgacagcgacctc
ctgaacatgagacatcaaggtcgtttcctatgggagacttacttttcctcctcggataac
gtgctgagcgccatcctgtccaccatgcgaaccagaatacaaattcctgctgctcccatc
ccagaagagccctccaaggagatccctcacaagacaggaaagactgcgggcactgatccc
aacatggcggacactggagacctagacctgggacccgttgagactgagccaccatatgcc
tcaccaaaatacctgcggaacttcacagtgaccattcgagacacttacagagcctggaac
actgccccgggaccattccatctttttccacataccccagtggaccccacgttaccctct
gaagccaagttccttgggtccgggaccggatttcggcctataggtgcaggagctggaggc
tctgggaaagagttccaagctgcactgggcggcaatgttcctcgggaacagtttacagtt
gtaatgttaacctacgagcgcgaagaagtcctgatgaactctttggagagactgaatggc
ctcccttacttgaataaagttgttgtagtgtggaattctcccaagccaccatctgaggac
cttatatggcctgacattggagtgcccattgtggttgttcgtacagaaaagaatagttta
aataatcgtttcttaccctgggatactattgaaacggaggcaattctttcaattgatgat
gatgcccaccttcgccatgatgaaattatgtttggctttcgggtttggcgggaggccaga
gatcggattgtgggttttcctggcaggtaccatgcttgggatatgacccaccagtcctgg
ctctacaactccaattattcctgtgaactatccatggtgctgactggcgctgccttcttt
cacaagtactatgcgtacctctactcctatatcatgccgcaggccattcgcgacatggtg
gatgagtacattaattgtgaagatattgccatgaacttccttgtctcccacatcaccagg
aaaccacctataaaggtcacatcacgctggactttccgctgcccaggatgtcctcaggct
ctctcgcatgatgactcccacttccatgaaagacataagtgcatcaacttctttgtgaag
gtctacgggtacatgccgctgctctacacccagttccgcgtggactcggtcctgttcaaa
acacggctgccacacgacaagaccaagtgtttcaaatttatctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (13)   
   Pfam (13)   
All databases (34)   

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