KEGG   Rhincodon typus (whale shark): 109927379
Entry
109927379         CDS       T06055                                 
Symbol
tars1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic isoform X1
  KO
K01868  threonyl-tRNA synthetase [EC:6.1.1.3]
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    109927379 (tars1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:rtp01007]
    109927379 (tars1)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rtp03016]
    109927379 (tars1)
Enzymes [BR:rtp01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.3  threonine---tRNA ligase
     109927379 (tars1)
Amino acid related enzymes [BR:rtp01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   109927379 (tars1)
Transfer RNA biogenesis [BR:rtp03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    109927379 (tars1)
 Prokaryotic type
    109927379 (tars1)
SSDB
Motif
Pfam: tRNA-synt_2b HGTP_anticodon TGS tRNA_SAD
Other DBs
NCBI-GeneID: 109927379
NCBI-ProteinID: XP_020382964
Position
1:54683486..54718076
AA seq 721 aa
MEVEVVTQKLEVMDVEGQPKVTSEKQKGGKKKNIKEGGDTMRAELDPWPAYINERLELYH
KLKAESDSILAERAMKESKPIIVTLPDGKQVQGDSWKSTPYQIACGISQGLADNVVIAKV
NGVVWDLDRPLEEDCSLALLKFEDEEAQAVYWHSSAHILGEAMERVFGGCLCYGPPIENG
FYYDMFLEEGGVSSNDFPALENLCKRIMKDKQPFERLEIKKETLLAMFKYNKFKCRILNE
KVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKSDMETLQRIYGISF
PDTKMLKEWERFQEEAKNRDHRKLGREQELFFFHELSPGSCFFLPKGAYIYSELITFIRS
EYNKRGFTEVVSPNIYNHKLWQTSGHWQHYSENMFSFEVEKEIFALKPMNCPGHCLMFDH
RPRSWRELPLRYADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCTMEQIEAEIKGCLDF
LRAVYNVFGFTFKLELSTRPEKFLGDVEVWNVAEKQLENSLNEFGEKWSLNPGDGAFYGP
KIDIKIKDAIGRYHQCATIQLDFQLPVRFNLTYVSHDGVDQNRPVIIHRAILGSVERMIA
ILTENYGGKWPLWLSPRQVMVVPVGPTCEEYAQQVQQQFHDAGLMSDVDLDQGCTLNKKI
RNAQLAQYNFILVVGEKEKSSGTVNVRTRDNKVHGERTIFETIQRLLQHKKSRSKHAEED
F
NT seq 2166 nt   +upstreamnt  +downstreamnt
atggaggtcgaggtagtgacgcagaaactagaggtcatggatgtcgagggccaacctaaa
gttacatctgagaaacagaaaggaggcaagaagaaaaacatcaaggaaggtggtgatacg
atgagagcggagttggatccatggccagcatatattaatgaacgccttgaactgtaccac
aaactcaaagctgaaagtgattctattttggcagaacgtgctatgaaagagagtaaacca
atcattgttactctaccagatggtaaacaagtacagggggactcctggaaaagtacccct
tatcagattgcatgtggaattagtcagggtttggctgataacgtggttattgctaaagta
aatggagtggtttgggatctggatcgaccattggaagaagactgcagtctcgcattgctt
aagtttgaagatgaggaggctcaggctgtgtactggcattctagtgcccatatactggga
gaggcgatggaacgagtctttggagggtgtctctgctatggcccaccaattgaaaatgga
ttttattatgacatgttcttggaagaaggaggtgtctccagcaatgattttccagctcta
gaaaatctatgtaaacgtattatgaaggataaacaaccatttgagagacttgaaataaaa
aaagagactcttctggctatgttcaagtacaacaaattcaagtgtaggattctaaatgag
aaagtgaatactcctactacaacagtgtataggtgtggacccttgattgacttgtgtaga
ggacctcatgtcagacacactggaaaaattaaggctctgaaaattcacaaaaattcttcc
acttactgggaaggcaagtctgatatggagacgctacagaggatttatggaatttctttt
ccagatacaaaaatgttgaaagaatgggaaaggtttcaggaagaggccaaaaacagagat
catagaaaactggggagggagcaagagttgtttttcttccatgaactcagcccaggaagc
tgttttttcctgcctaagggagcttatatatacagtgagctcattacattcattaggagt
gagtacaacaaaagaggctttacagaggtggtgtctcccaatatttacaaccacaaactg
tggcaaacatcaggacactggcagcactacagtgagaatatgttttcttttgaagtggag
aaggaaatctttgccctaaaacctatgaattgtccaggtcactgtctcatgtttgatcat
cggccacggtcctggagggaactgccattgcgatatgctgactttggagtgcttcatcgt
aatgagctgtctggagcactgactggcctgactcgggtccgcagattccaacaagatgat
gctcacattttctgtaccatggagcagattgaagcagaaattaaaggttgcctggacttc
ctgcgtgctgtctacaatgtctttggatttacttttaaacttgaactttccactcgccca
gagaagtttcttggtgatgttgaagtctggaacgtagctgagaagcaacttgaaaatagc
ctcaatgagtttggtgagaagtggagtttgaatcctggtgatggtgctttttatgggccc
aagattgacataaaaatcaaagatgctattggtagatatcatcaatgtgctacaattcag
ttggatttccagttgcctgtcagatttaacttgacctatgtgagtcatgatggtgttgac
cagaataggcctgttattattcatcgggcaatcctaggctctgtggaacgaatgattgca
attttgactgaaaactatggtggcaaatggcctctctggctgtctccacgtcaagttatg
gttgtacctgtgggacctacatgtgaagaatatgcacaacaggttcaacagcaatttcat
gatgctgggttaatgtctgacgttgacctcgatcaaggatgtacactgaacaagaagatc
cgaaatgcacaacttgctcaatataactttatccttgtggttggtgaaaaagagaagagc
agtggaactgtaaatgtgcgcacaagagacaacaaggtgcacggggagcgcacaatattt
gaaaccattcagaggcttttgcagcacaagaaatccagaagtaaacatgctgaagaggat
ttctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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