KEGG   Rhincodon typus (whale shark): 109927450
Entry
109927450         CDS       T06055                                 
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit D isoform X1
  KO
K15215  TATA box-binding protein-associated factor RNA polymerase I subunit D
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rtp03021]
    109927450
Transcription machinery [BR:rtp03021]
 Eukaryotic type
  RNA polymerase I system
   Basal transcription factors
    SL1/TIF-1B
     109927450
SSDB
Motif
Pfam: TAF1D
Other DBs
NCBI-GeneID: 109927450
NCBI-ProteinID: XP_020383062
Position
26:complement(25638262..25657262)
AA seq 385 aa
MHRASGEGDLHSNAEENWREKMEGETNMTGTKDDSENSVLLFSDEDDGIEQLLQDISKKT
MKVVAEQVDSPISTHSSEGDHIPDTIQDKCQQKVLNYQPVCTNPFPPPGDIGRNMVELSE
RESTDSESSLFKTQHPVVPLGQARRRGTGKCPSRSARDQTAENTDSSTDSDDIPYRPNYV
MVGQVRKWRRHKKYKNKSVYKRTGRPVGRPRSSITKAEKKRRLKERGLQFPFVQKEYGRK
HLPFKMIFAYEQAALCGLFTYMKELKCQKHLIKSLEKINVDCPDRECGPIRQCKYLDEKR
PVSPIQESSDETCIEDFDNENTFGVKVVDNSCFVMEKFGKKKKSLRKKNSKGKNKDKCTP
NGKSKAIEKNKSITGQQNNTESSST
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgcaccgagcttctggtgaaggggatttgcacagcaatgctgaagaaaattggagagaa
aaaatggaaggtgaaacaaatatgacaggcacaaaagatgacagtgaaaatagtgttttg
ctattttcagatgaagatgacgggattgagcagttgctacaagatattagcaagaagaca
atgaaagtagttgctgagcaagtggactcgcccatctcgacacacagctcagaaggagat
catattcctgatactattcaagacaaatgtcagcagaaagtgttgaattatcaacctgtg
tgcactaatccatttcctcctcctggcgatattggaagaaatatggtagagttatcagag
cgggaaagcacagattcggagagcagtttatttaaaacacagcatcccgttgtaccacta
ggacaggcgagaaggcggggcaccggaaaatgtccatccagatcagccagagatcaaact
gcagaaaataccgacagctcgactgactcagatgacattccataccgtccaaattatgtg
atggttggtcaagtaaggaaatggcgacgacacaagaaatacaaaaacaaatctgtttat
aagaggactgggcgtccagtaggaaggcctcgatcatccataaccaaggctgagaagaag
aggagattgaaggaacgagggctgcagtttccatttgtgcagaaggaatacggaaggaag
catttaccgtttaagatgatttttgcctatgagcaagcagctctgtgtggattatttact
tacatgaaggagctaaaatgtcaaaagcacctcataaagtccttagaaaaaataaatgta
gactgtccagacagagagtgtggtccaataaggcaatgcaagtacctggatgagaaaaga
ccagtttcaccgatacaagaaagcagtgatgaaacctgcattgaagactttgataatgaa
aacacgttcggtgtaaaagttgtggataacagctgttttgtaatggaaaagtttggaaaa
aagaaaaagagccttaggaaaaaaaactccaaaggcaaaaataaagacaaatgtacacct
aatggcaaaagtaaagccattgagaaaaataaatcgataacaggccaacaaaataacaca
gagtcttcctctacctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (11)   
   RefSeq(pep) (11)   
DNA sequence (14)   
   RefSeq(nuc) (14)   
Protein domain (1)   
   Pfam (1)   
All databases (32)   

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