KEGG T06055: 109933836

Rhincodon typus (whale shark): 109933836

Entry

109933836         CDS       T06055

Name

(RefSeq) syntaxin-binding protein 1 isoform X1

K15292

syntaxin-binding protein 1

Organism

rtp Rhincodon typus (whale shark)

Brite

KEGG Orthology (KO) [BR:rtp00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rtp04131]
    109933836
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtp04147]
    109933836
Membrane trafficking [BR:rtp04131]
Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    109933836
SNARE
  SNARE associated proteins
   Syntaxin-binding proteins
    109933836
Exosome [BR:rtp04147]
Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   109933836

SSDB

Motif

Pfam:

Sec1 SGT1 YlbD_coat FRB_dom

Other DBs

NCBI-GeneID:

109933836

NCBI-ProteinID:

XP_048469480

Position

28:17183492..17236345

AA seq 580 aa
MNDVIKKVKKKGEWKVLVVDQLSMRMLSSCCKMTDIMTEGVTIVEDINKRREPLPSLEAV
YLITPSEESVRALINDFKDAPSSKYRAAHVFFTDSCSDPLFNELVKSRTSKVIKTLTEIN
IAFLPYESQVYSLDVPDAFQSFYSPHKTQLRNPLMERLAEQIATLCATLKEYPAVRYRGD
YKENAMLAQLVQDKLDAYKADDPTMGEGPDKARSQLLIIDRGFDPVSPVLHELTFQAMAY
DLLPVENDVYKYETSGIGENRVKEVLLDEDDDLWITLRHKHIAEVSQEVTRSLKDFSSSK
RMATGEKTTMRDLSQMLKKMPQYQKELSKYSTHLHLAEDCMKHYQGTVDKLCRVEQDLAM
GTDAEGEKIKDPMRAIVPILLDNNVSTYDKIRIILLYIFLKNGITEENLNKLIQHAQIPP
EDSEIINNMAHLGIPIITDSTLRRRNKPERKERISEQTYQLSRWTPLIKDIMEDAIDDKL
DTKHYPYISARSTASFSATAVSARYGHWHKNKTPGEYRTGPRLIIFIIGGSSCSEMRCAY
EVTQANGKWEVLIGSTHILTPQKLLNSLKKMNKPDEEASS

NT seq 1743 nt +upstreamnt +downstreamnt
atgaatgatgtcatcaagaaggtgaagaagaagggtgaatggaaggtgctcgtggtggat
cagctcagcatgcgaatgctgtcgtcctgttgcaagatgactgatattatgacagagggt
gtcacaattgtggaagacataaataaaaggagagaaccgctccccagtttggaagcagtt
tacctgatcacaccctctgaagaatctgtccgtgcgctgatcaatgattttaaggatgcc
ccctcctctaagtacagggcagctcatgtcttcttcaccgactcttgttcagatccattg
tttaatgaactggtaaagtctcgtacatcaaaagttattaaaacccttactgagatcaac
attgcctttcttccatatgagtcacaggtttactcactggatgtaccagatgcattccag
agcttttacagcccccacaagacacagttgcgaaaccctctcatggaacgattagcggag
cagattgcaactctgtgtgccacactgaaagagtatcctgcggtcagatacaggggggat
tataaagaaaatgccatgcttgcacagctggtccaagataaactcgatgcatacaaagct
gatgatccaaccatgggtgaaggaccagacaaagcccgctcacagctattgataattgac
cgtggatttgaccccgtatcccctgttctccatgaattgaccttccaggcgatggcctat
gacttgctgcctgttgaaaatgacgtatacaagtatgaaacgagtggaattggagaaaat
cgggtcaaggaggtccttctggatgaggatgatgatctctggattaccctgcgtcacaag
catattgcagaagtgtcccaggaggttacgcggtccttgaaagacttttcctcgagcaag
agaatggcaactggtgagaagacaaccatgagggatctgtctcagatgctgaagaagatg
ccacagtatcagaaggaactaagcaagtattccacccatcttcaccttgctgaggattgt
atgaaacactatcagggcactgtggataaactgtgccgagttgaacaggatttggccatg
gggactgatgctgagggagagaagatcaaggatccaatgagagccattgttcccattctg
ctggacaataatgtttccacttacgataaaattcgcatcatccttctctacattttcctt
aagaatggaatcactgaggagaatctgaacaaactgattcaacatgcccagatcccaccc
gaggacagtgagatcattaacaacatggctcacttgggaatccccatcattacagattca
accttacgtcgtaggaacaagccagagcgtaaagagcgtatcagtgaacagacctatcag
ctgtctcgatggacaccactcatcaaggacatcatggaggatgccattgatgacaaattg
gacactaaacattacccatacatttctgcccgttctactgcctctttcagtgccactgca
gtcagtgcccgatatggccactggcataaaaataaaacaccaggggagtacaggacaggg
ccacgcctcatcatcttcatcattggagggagctcatgctctgagatgcgctgtgcttat
gaggtcacacaggccaatggaaagtgggaggtattaataggatcaacacacattctcact
ccccagaagttacttaactcgttaaagaaaatgaataagccagatgaagaagctagcagt
taa

All links

Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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