KEGG   Rhincodon typus (whale shark): 109933965
Entry
109933965         CDS       T06055                                 
Name
(RefSeq) elongation factor 1-alpha 2
  KO
K03231  elongation factor 1-alpha
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109933965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rtp03019]
    109933965
   03016 Transfer RNA biogenesis [BR:rtp03016]
    109933965
   03012 Translation factors [BR:rtp03012]
    109933965
   04131 Membrane trafficking [BR:rtp04131]
    109933965
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rtp04147]
    109933965
Messenger RNA biogenesis [BR:rtp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     109933965
Transfer RNA biogenesis [BR:rtp03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    109933965
Translation factors [BR:rtp03012]
 Eukaryotic type
  Elongation factors
   109933965
Membrane trafficking [BR:rtp04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    109933965
Exosome [BR:rtp04147]
 Exosomal proteins
  Proteins found in most exosomes
   109933965
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4
Other DBs
NCBI-GeneID: 109933965
NCBI-ProteinID: XP_048464436
Position
19:complement(3029507..3053161)
AA seq 464 aa
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETPKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSEKRYDEIVKEVSAYIKK
IGYNPGTVPFVPVSGWHGDNMLEASPNMPWFKGWKVERKEGNANGVTLLEALDTILPPTR
PITKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNITTEVKSVEMHHEALS
EALPGDNVGFNVKNVSVKDVRRGNVCGDSKNDPPTEACNFTAQVIILNHPGQISAGYSPV
IDCHTAHIACKFAELKEKIDRRSGKKLEDNPKTLKSGDAAIVEMSPGKPMCVESFSKYPP
LGRFAVRDMRQTVAVGVIKNVEKKAVSAGKITKSAQKAQKAQGK
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgggcaaagagaaaactcacatcaacatcgttgtcattggtcatgtcgattccggtaaa
tctaccaccaccgggcacctcatctacaaatgtggcggcatcgacaagagaaccatcgaa
aaattcgagaaggaggcggcagagatgggtaaaggttccttcaaatatgcctgggtcctg
gacaagctgaaggctgagcgtgagcgaggcatcactattgacatctctctgtggaagttt
gagacaccaaagtattacatcaccatcattgatgctcctggccacagggacttcattaag
aacatgatcactggaacctctcaggctgactgcgctgtgctgattgtagctgctggtgtt
ggtgaattcgaagccggtatctccaagaacggtcagacccgtgagcacgcgctcctggcc
tacacactgggggtgaagcagctcattgtgggcgtcaacaaaatggactccaccgagcct
ccgtacagtgagaagcgctatgatgaaattgtgaaggaagtcagcgcctacattaaaaag
atcggctacaacccgggcactgttccctttgtgcctgtgtctggttggcatggtgataac
atgctggaggcctctcccaatatgccatggttcaaaggttggaaggtcgaacgcaaggag
ggtaatgccaatggggtgacactgctcgaagccctggacacaattctacccccaacccgc
cccatcaccaaacccctgcgcctgccccttcaggatgtttacaagattggaggtattggt
acagtccccgttgggcgtgtggagaccggggtgctgaaaccaggcatggtggtgaccttt
gcccccgtcaacatcacaacggaggtgaagtcggtggagatgcaccatgaagccttgtcc
gaggccctgcctggggataatgtgggcttcaatgtgaagaacgtgtccgtcaaggatgtt
cgccgtggcaacgtgtgcggagacagtaagaacgacccacccacagaagcctgcaacttc
actgcccaagtgatcatcctgaaccaccctggtcagatcagtgctggctactccccagtc
attgactgccacactgcacacattgcctgcaagtttgccgagctcaaagagaagattgac
cgtcgttccggcaagaaactggaggacaatccgaaaaccctgaagtctggtgatgctgcc
attgttgagatgtctcctgggaaacccatgtgtgtggagagcttttccaagtaccctcct
ctggggcggttcgctgtgcgtgacatgaggcagactgttgcggtgggagtcatcaagaac
gttgagaagaaagcagtcagtgctggcaagatcacaaagtctgcacagaaagctcagaag
gctcagggcaaatga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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