KEGG   Rhincodon typus (whale shark): 109934590
Entry
109934590         CDS       T06055                                 
Name
(RefSeq) DNA topoisomerase 1 isoform X1
  KO
K03163  DNA topoisomerase I [EC:5.6.2.1]
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rtp03032]
    109934590
Enzymes [BR:rtp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     109934590
DNA replication proteins [BR:rtp03032]
 Eukaryotic type
  DNA Topoisomerases
   109934590
SSDB
Motif
Pfam: Topoisom_I Topoisom_I_N Topo_C_assoc
Other DBs
NCBI-GeneID: 109934590
NCBI-ProteinID: XP_020388903
Position
19:complement(12270359..12348678)
AA seq 771 aa
MSVDHLSQLNTDSRLNDSHKSSKSEEKHKHKEHKHKEHKSKDRDKDREKSKHSSSSSKNH
SNSEHKDSSEKKHKDKEREKDKVKHKDGSSDKHKHKDKEKRKEEKDKIHSSSSGSGDRIK
KENGFTSPPRIKQEPDDDYIPSIKVENKPMKRPREDDDVDFKPKKIKSEDVKKAKKRKSE
MDMKNKKSKDKVESSGQGKKKKKEEEDKWKWWEEERYTDGVKWKFLEHKGPVFAPPYEPL
PDNVHFYYDGKPMKLSPQCEEVATFFGKMLDHEYTTKDIFRKNFFKDWRKEMKPEEKAVI
TDLNKCNFEEINQYFKAQSEARKQMSKEEKQKLKEENEKLLQEYGFCIMDNHKERIANFK
IEPPGLFRGRGNHPKMGMLKRRIRPQDIIINCSKDSKVPSPPAGQKWKEVRHDNKVTWLV
SWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARTLKKHVDKIRAQYREDWKSKEMKVRQ
RAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHINLHAEVDGQEYVVEFDFLGKDS
IRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTSILNKHLQELMDGLTAKVFRTYNA
SITLQQQLKELTNPDENVAAKILSYNRANRAVAILCNHQRAPPKTFEKSMQNLQTKIDAK
KEQIGLARRELKGAKADYKVRKDEKCRKSVESKKKALQRLEDQLMKLEVQATDREENKQI
ALGTSKLNYLDPRISIAWCKKWGIPIEKIYNKTQREKFAWAIDMADEDFEF
NT seq 2316 nt   +upstreamnt  +downstreamnt
atgagcgttgatcacctctcccagctcaatacggattcccgcttgaacgattctcacaag
tccagcaaaagtgaagagaaacacaagcataaagagcacaagcataaggagcacaaatca
aaagatcgggacaaggatcgtgagaaatccaagcacagctcctccagttccaagaatcat
agcaacagtgagcacaaagattcttcggaaaagaaacacaaagataaggaaagggaaaaa
gacaaagtaaagcataaagatgggagctctgacaaacacaaacataaggacaaggagaaa
aggaaggaggagaaggataagatccattcttcaagtagtggttctggagatagaataaag
aaggagaatggtttcacaagccctcctcgtataaagcaagagccagacgatgattatatc
ccatccattaaggtggaaaacaagccaatgaagaggccccgtgaagatgatgatgttgat
ttcaaaccgaagaagatcaaatcagaagatgtaaagaaagccaaaaaaagaaaatctgaa
atggacatgaagaacaaaaagtcaaaagataaagtggaaagttctggacagggaaagaag
aagaagaaagaggaggaggacaaatggaaatggtgggaggaagaacgttatacagatggt
gtgaaatggaaatttctggaacacaaaggaccagtatttgctccaccctatgagccactc
ccagataatgttcacttctattacgatgggaaacctatgaagctgagccctcagtgtgaa
gaagttgcaacattctttggtaaaatgcttgatcatgagtacactacaaaagacatcttt
aggaagaatttcttcaaagactggcggaaggaaatgaaacctgaagaaaaggcagtcata
acagatctcaacaagtgtaactttgaggaaataaaccaatattttaaggcccaatctgag
gctcgaaagcagatgtccaaagaagagaaacagaaattaaaagaagaaaatgaaaagctt
ctacaagagtacgggttttgtataatggacaaccacaaagagcggattgcaaacttcaag
attgaaccaccgggactcttccgtggccgtggtaaccacccaaagatgggcatgctgaaa
agaaggatcaggccacaggacataatcatcaactgtagtaaggactccaaggttccatca
cctcctgcaggccagaagtggaaggaggtacgacatgacaacaaagtgacttggctagtg
tcatggactgagaacatccagggctccatcaaatacatcatgttgaatcccagctccaga
ataaagggtgagaaggattggcaaaaatatgagactgctcggacgttaaagaagcatgtt
gacaagatacgtgcacagtacagggaggactggaagtcaaaagagatgaaggtccggcag
cgtgctgttgcactttactttattgacaagctagctctgagagctggaaatgagaaagaa
gaaggtgagactgcagacactgtgggttgttgctcacttcgagtagagcacataaacctg
catgctgaagttgatggtcaggaatacgtggttgaatttgacttcctgggtaaagactcc
atccgatattacaacaaagtgccagtggaaaaaagggtgttcaagaatcttcaattattt
atggagaacaagcaacctgaagatgacctttttgaccgactcaatacttcaatcctcaat
aagcatctccaggaactaatggatggacttacagctaaagtattccgtacctacaatgct
tctatcaccttgcagcagcaattgaaggaactgaccaacccggatgaaaatgttgcagca
aaaatactttcttataatcgtgccaacagagcagtcgctatcctttgtaaccatcagcgg
gcacctcccaaaacatttgaaaagtcgatgcaaaacctgcaaaccaaaattgatgcaaag
aaagaacaaattggactagccaggagagagctgaagggtgccaaagctgactataaagtt
agaaaagatgaaaaatgtagaaaatctgtggaaagtaagaagaaagctctccagcggctt
gaagaccagttgatgaaattggaagttcaggctactgaccgggaagaaaataagcagata
gctcttgggacttccaaactcaattacctggatcctaggatcagcatcgcctggtgtaag
aaatggggcatcccgattgagaagatctacaataaaacccaacgcgagaagtttgcctgg
gccattgatatggctgatgaagactttgaattttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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