KEGG   Rhincodon typus (whale shark): 109935395
Entry
109935395         CDS       T06055                                 
Symbol
appa
Name
(RefSeq) amyloid beta (A4) precursor protein a isoform X1
  KO
K04520  amyloid beta A4 protein
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rtp01002]
    109935395 (appa)
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:rtp00535]
    109935395 (appa)
   00536 Glycosaminoglycan binding proteins [BR:rtp00536]
    109935395 (appa)
Peptidases and inhibitors [BR:rtp01002]
 Peptidase inhibitors
  Family I2: Kunitz - BPTI family
   109935395 (appa)
Proteoglycans [BR:rtp00535]
 Cell surface proteoglycans
  Others
   109935395 (appa)
Glycosaminoglycan binding proteins [BR:rtp00536]
 Heparan sulfate / Heparin
  Others
   109935395 (appa)
SSDB
Motif
Pfam: APP_E2 APP_amyloid APP_Cu_bd APP_N Beta-APP Kunitz_BPTI Baculo_gp41 Spore_III_AB DUF5033 Insulin_TMD
Other DBs
NCBI-GeneID: 109935395
NCBI-ProteinID: XP_048458906
Position
11:complement(11728567..11818587)
AA seq 666 aa
MEVYPDLQITNVVEANQPVTIQNWCKKGRKQCKGHPHIVVPYRCLVGEFVSDALLVPDKC
KFLHREKMDTCESHLYWHTVAKETCGDKIMNLHDFGMLLPCGIDEFRGVEFVCCPIPEEN
DKIDDSDMDEEDSDVWWGGDDDDYADGSDKIVEEQPIEDESEIDDEDDDELDGEEADDQY
EDPTEHTTSSTTTTTEAIEEVVREVCSEQAETGPCQAMLPRWYFDISEGKCAQFIYGGCG
GNRNNFASEEYCLAVCNSVIPTTAASTPDAVDKYLETPGDENEHAYFQKAKERLEAKHRE
RMSKIMREWEEAERQAKNLPKADKKAVIQRFQEMVESLEQEAASERQQLVETHMARVEAM
LNDRRRIALENYLAALQADPPRPRHVLNALKKYIRAEQKDRQHTLKHFEHVRMVDPKKAA
QIKSQVMTHLRVIDERMNQSLSLLYKVPSVAEEIQDEVDELLQKEQSYIDDLVANSVSDT
RISYGNDALVPSLSETKTTIELLPDDGEFNLDDFQPLHPFEVDSIPANTENEVEPVDARP
APDRGLTTRPGSGLTGIKTEEIAEVKMETEFRQDSGYEVHHQKLVFFPEDVGSNKGAIIG
LMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKF
FEQMQN
NT seq 2001 nt   +upstreamnt  +downstreamnt
atggaggtttatcctgatttgcagataacaaatgttgttgaggccaaccaacctgtgaca
atccagaactggtgtaaaaagggccgtaagcagtgtaaagggcacccccacatcgtagtt
ccttatagatgcttggttggtgagtttgtcagtgatgccctccttgtcccagataaatgc
aagtttctacatcgggagaagatggacacctgtgagagccatctgtattggcacactgtg
gcgaaagagacctgtggtgataagataatgaacctgcatgactttgggatgttgctgcct
tgcggtattgatgagtttcgtggagtggaatttgtttgctgccccattccagaagaaaac
gacaagattgatgactctgacatggatgaagaggactcagatgtgtggtggggaggcgat
gatgatgactatgcagatggcagtgataaaattgttgaagagcaaccaatagaggatgaa
agtgaaattgatgatgaagatgacgatgaactggatggtgaagaggctgatgaccagtat
gaggatcccactgaacatacaaccagtagcactactaccactacagaggccattgaagaa
gttgtgagagaggtttgctctgagcaagcagaaaccgggccttgtcaagctatgttacct
cgatggtactttgacatcagtgaaggaaaatgtgcacagttcatttatggaggctgtgga
ggaaacagaaacaactttgcctccgaagagtactgtttggccgtctgtaacagcgtcatc
cctaccacagctgccagcacaccggatgctgttgacaagtaccttgaaacacctggcgat
gagaatgagcatgcttatttccagaaggcaaaggagaggttggaagccaagcatagagag
cgtatgtcaaagataatgcgagaatgggaagaagctgagcgtcaagcaaaaaatctgcca
aaagctgacaaaaaggcagtcattcagcgtttccaagagatggtggaatcactagagcag
gaagcagcaagtgaaagacagcagttggtagagacccacatggcaagggtggaggccatg
ctaaatgatagacgccgtattgcattggaaaattaccttgctgcactccaggctgatcca
ccccggccccgacatgtcctcaatgcactcaagaagtatattcgtgctgaacagaaggac
agacagcacacactgaaacattttgagcatgtccgcatggttgaccccaagaaggcagct
cagatcaaatcacaagtaatgactcatttacgtgtaattgatgagcgtatgaaccagagc
ctgtctctgctttacaaggttccttcagttgcagaagagatccaggacgaagttgatgaa
ctgctgcagaaggagcaaagctacattgatgacttggtagcaaactctgtcagtgacacg
cgaattagttatggaaacgatgcactggtcccatctctctctgagacgaaaacaacaata
gaacttctaccagatgacggagagtttaatcttgatgactttcaacctctgcatccattt
gaggttgactccatccctgctaacacagagaatgaagttgaaccagttgatgcgcggcca
gcaccagacagaggactaaccactcgaccaggctctggactcactggcattaagacagag
gagatagctgaagtaaagatggagactgaattccggcaagattctggttatgaagtccat
catcagaagctggtgtttttcccagaggatgttggatcaaataaaggagctatcattggt
ctcatggttggtggcgttgtcatagcaacagtgattgtcatcaccctggtgatgctgaaa
aagaagcagtatacatctattcaccatggtgttgttgaggttgatgctgctgtaactcca
gaggaacgccacctctcaaagatgcagcaaaatggatatgagaatccaacgtacaaattc
tttgaacagatgcaaaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (22)   

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