KEGG   Rhincodon typus (whale shark): 109936417
Entry
109936417         CDS       T06055                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA damage-binding protein 1-like
  KO
K10610  DNA damage-binding protein 1
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp03420  Nucleotide excision repair
rtp04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109936417
  09124 Replication and repair
   03420 Nucleotide excision repair
    109936417
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rtp04121]
    109936417
   03400 DNA repair and recombination proteins [BR:rtp03400]
    109936417
Ubiquitin system [BR:rtp04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Adoptor protein
     109936417
DNA repair and recombination proteins [BR:rtp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      109936417
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      109936417
SSDB
Motif
Pfam: MMS1_N
Other DBs
NCBI-GeneID: 109936417
NCBI-ProteinID: XP_020390622
Position
Unknown
AA seq 521 aa
FHACIQQGEGKDLLFILTAKYNACILEYKQNGENIDIITRAHGNVQDRIGRPSETGIIGI
VDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQVPTICFVYQ
DPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGALIIGQESITYHNGD
KYLAIAPPAIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEREEQMDGNITVRDLRVE
LLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVAGMETFTNLGPIVDMC
VVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDSTRDTDD
MLVLSFVGQTRVLMLNGEEVEETEXASFVDDQQTFYXGNVAHQQLIQITSGSVRLVSQEP
KSLVSEWKEPNGKNISVASCNNSQVVVAVGRVLFYLEIHPKELKQISFIEMEHEVACLDI
TPLADSSSMSPLCSVGLWTDXSARILKLPSFETLHKEMLGG
NT seq 1566 nt   +upstreamnt  +downstreamnt
catttcatgcctgtattcaacagggagaaggcaaggacttgcttttcattctgactgcaa
aatataatgcctgtattctggagtacaaacagaatggggaaaacatcgatatcatcacac
gagctcatggaaatgtacaggatcgtataggccgtccctctgagactggaatcataggca
ttgtggaccctgagtgtcgcatgataggtctcaggctgtatgatgggctctttaaagtga
ttccattggatagagacaacaaagagctaaaggcattcaatatccggctggaagaacttc
atgtaattgatgtgaaattcttgtatggctgtcaggtcccaacaatttgctttgtctatc
aggatccccagggtcgtcacgtgaagacctatgaagtatccttacgagagaaagaattta
acaagggaccctggaaacaagaaaatgttgaggctgaggcatcaatggttattgcagttc
cagaaccatttggaggagcgctaatcataggccaagaatccattacataccataatggtg
ataagtatctcgcaattgcaccaccagctatcaagcaaagcacgattgtttgccacaacc
gtgtggatcccaatggttcccgctaccttctgggagatatggaaggtcgtctgtttatgc
tgttactggagagggaagaacaaatggatggaaacattactgtcagagacctccgtgtag
aactgttgggagagacatccattgcagaatgtttgacatatttggataatggagttgtat
ttgttggatctcgtcttggagactctcagcttgtcaagctaaatgtggacagcaatgagc
aagggtcctatgttgctggcatggaaactttcaccaatttaggtcctattgtggatatgt
gtgtagttgatctggaaagacaaggacagggccagctggttacttgttcaggagcattta
aggaaggttctctaagaataattcggaatggaattgggatccatgagcacgctagtattg
atcttcctggtattaaaggtctgtggccattgcgttccgattccactcgtgacactgatg
atatgttggtcctttcatttgttggacaaactcgtgtgttgatgcttaatggggaggagg
tagaagagactgaanatgccagctttgttgatgaccaacagaccttctatnntggaaatg
tggctcatcagcagctcattcagataacatctggttcggtgcgactggtcagccaagaac
cgaaatcgctggttagtgagtggaaagaaccaaatggaaagaatatcagtgttgcgtcct
gtaataacagtcaggttgtggtagcagtaggccgtgtattgttttacctggagattcacc
cgaaagagctcaaacaaatcagctttatagagatggagcatgaggttgcttgcctagaca
tcactccattggctgacagtagtagtatgtcacccctgtgctctgttgggctttggacag
atnattcagctcggatcctcaagctaccatcatttgaaaccctgcataaagaaatgcttg
gtggag

DBGET integrated database retrieval system