KEGG   Rhincodon typus (whale shark): 109936906
Entry
109936906         CDS       T06055                                 
Name
(RefSeq) tubulin alpha chain-like
  KO
K07374  tubulin alpha
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04145  Phagosome
rtp04210  Apoptosis
rtp04530  Tight junction
rtp04540  Gap junction
rtp04814  Motor proteins
rtp05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    109936906
  09143 Cell growth and death
   04210 Apoptosis
    109936906
  09144 Cellular community - eukaryotes
   04530 Tight junction
    109936906
   04540 Gap junction
    109936906
  09142 Cell motility
   04814 Motor proteins
    109936906
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109936906
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rtp03019]
    109936906
   03036 Chromosome and associated proteins [BR:rtp03036]
    109936906
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rtp04812]
    109936906
   04147 Exosome [BR:rtp04147]
    109936906
Messenger RNA biogenesis [BR:rtp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     109936906
Chromosome and associated proteins [BR:rtp03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     109936906
Cytoskeleton proteins [BR:rtp04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    109936906
Exosome [BR:rtp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109936906
  Exosomal proteins of other body fluids (saliva and urine)
   109936906
  Exosomal proteins of colorectal cancer cells
   109936906
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 109936906
NCBI-ProteinID: XP_020391107
Position
7:complement(93803398..93810344)
AA seq 450 aa
MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGHRPDMKNANEADDSFDTFFCETGTGK
HVPRAIFVDLEPTVIDEIRTGTYRQLFHPEQLITGNEDAANNYARGHYTIGKELIDSVLD
RICKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPRISTA
VVEPYNSILTTHTTLEHTDCSFMVDNEAIYDICHKNLDVEHPGYINLNRLIGQIVSSITA
SLRFDGALNVDLAEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPGN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKARRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSIADEEEEEEEF
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgtgaatgtatctccatccatgttggccaggctggtgtccagatgggcaatgcctgc
tgggagctgtactgtttggagcatgggatccagcctgatggtcaccgacctgatatgaaa
aatgcaaatgaggctgatgactcctttgacaccttcttctgcgagactggaaccgggaaa
catgtgcccagagcaatctttgtggacttggagccaactgtgatcgatgaaattcgtact
ggtacttatcgtcagctgttccaccctgagcagctcatcactgggaatgaagatgctgcc
aataactatgcccgtgggcactacacaattggcaaggagctgattgactctgtcttggac
cgaatttgcaagttggctgaccaatgcaccggtcttcaaggtttcctggtcttccatagt
tttggtggaggcacaggctcaggattcacctcactgctgatggaacgtctctcagttgac
tatggcaagaagtccaagctggagttttccatctacccagctcccaggatctccacagct
gtggtggaaccttacaactccatcctgaccactcacaccacactggaacacactgattgt
tccttcatggtggacaatgaagccatctatgacatctgccacaaaaacctggatgttgaa
catccaggttacatcaacctgaaccgtctgatcgggcaaattgtgtcatcaatcacagct
tctctccgctttgatggagccctaaatgttgacttggcagaattccaaactaacttggtg
ccttatccacgtatccatttccctctggtgacatatgccccagtcatctcagctgagaaa
gcttaccatgagcagctgtctgtggctgagatcaccaatgcctgctttgaaccaggcaac
cagatggtcaagtgtgacccacgccatggcaagtacatggcttgttgcctgctctaccgt
ggtgatgtggtgccaaaagatgtcaatgctgccattgccaccattaaggccaggcgttcc
atccagtttgtggactggtgcccaactggtttcaaagttggcatcaactaccagccccct
acagtggtgcctggtggggacctggccaaggtgcagcgagctgtgtgtatgctaagcaac
accacagccattgctgaagcctgggctcgtcttgaccacaagtttgatctgatgtacgcc
aagcgtgcctttgtgcattggtacgtgggtgaggggatggaggaaggggaattctcggag
gctcgtgaagacatggctgccttggagaaagattatgaagaggttggtgctgacagtata
gctgatgaggaagaggaggaggaggaattttga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (6)   
   KEGG PATHWAY (6)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (20)   

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