KEGG   Rhincodon typus (whale shark): 109938449
Entry
109938449         CDS       T06055                                 
Name
(RefSeq) CPD photolyase isoform X1
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rtp03400]
    109938449
Enzymes [BR:rtp01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     109938449
DNA repair and recombination proteins [BR:rtp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    109938449
 Prokaryotic type
    109938449
SSDB
Motif
Pfam: DNA_photolyase DUF5553
Other DBs
NCBI-GeneID: 109938449
NCBI-ProteinID: XP_048460752
Position
13:26650547..26684508
AA seq 606 aa
MSKNDKQAHETTRCNANDSEYKKNIEKKSDKKKTAFSSLSNSLKTSTKVSMKKPNHNGSC
REDSPKLQSKGKRKVEDRAPRLIEGEMSNPRMNKKRKIEDQAEASPSRERNLLESINKSR
LSTAKSVEEFNFNKKRIRLLSKTESIRENSQGIIYWMSRDQRVQDNWAFLYAQWLALKHK
LPLHVCFCLVPKFLDATIRHFGFMLKGLHEVAEECKQLNISFHLLIGFAKDVLPDFVKEH
NIGGMVTDFSPLRLPLEWIENVRYNLPEDIPFIQVDAHNVVPCWVASDKQEYSARTIRKK
IHDKLPQFLTDFPPVIQHPFSSSLKAELIDWDAAAASLQVDRTVKEVDWAKPGTAAGLTR
MESFINEQLKHFNTDRNNPSKTALSNMSPWFHFGQISVQRAVLEIRKYRNKFKDSVDSYI
EEAVVRRELADNFCFYNKQYDKIAGASDWAQKTLQMHSKDKRPYVYTLKELEDGRTHDSL
WNAAQLQMIHEGKMHGFLRMYWAKKILEWTASPEEALQFSIYLNDRYELDGRDPNGYVGC
MWSICGIHDQGWKERPIFGKIRYMNYNGYIQYSSSRLYWNVMDKKICFIIGLYQLPCHLS
QDIALQ
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgtctaagaatgataaacaagcccacgagacgactcgttgcaatgctaacgattctgag
tacaagaaaaatattgaaaagaaatcagataaaaagaaaactgcattttccagcttgtcc
aacagtctgaaaacatccacaaaagtatcaatgaagaaacctaatcataatggctcctgt
cgggaagattccccaaagcttcaatctaagggaaaaagaaaagtggaagacagagctcca
agattaattgagggagaaatgtccaatcctaggatgaataaaaagaggaaaattgaagac
caggctgaggcgtctccctctagagaaaggaatctgttggaaagtatcaataagtcacgt
ttgtccacagcaaaatcggtggaagaatttaattttaacaaaaaacgcatccgtctcctt
tctaaaacagagagcatcagggaaaactctcagggaattatttactggatgtcccgcgac
cagagagtacaggataactgggctttcttatatgcacaatggctagctcttaagcataaa
ctcccactccatgtctgcttctgtctggtgcccaaattcctagatgccaccatccgccat
tttggtttcatgctgaagggactccacgaggttgctgaggaatgcaagcagctgaatatt
tctttccatttacttattggattcgccaaagatgtattgccagactttgttaaagagcac
aacattggagggatggttacagatttctctccattgcgtctcccactggagtggattgag
aatgtgagatacaacctaccagaagatataccatttattcaggtcgatgctcacaatgtt
gtaccctgctgggtagcttcagacaaacaagaatacagtgccagaacaatcaggaagaaa
attcatgataaactccctcagttcctgacagattttcctccagttatccagcatcctttt
agctcatccctgaaggcagagctgattgattgggatgcagccgcagcaagccttcaagtg
gatcgtacagttaaggaagttgactgggctaaacccgggactgcagcaggtctaactagg
atggagtcattcattaacgagcagcttaagcatttcaacactgacagaaacaacccaagt
aaaactgccttgagtaatatgtcaccatggtttcactttggtcagatttcagttcagcga
gcagttctggaaataaggaaataccgcaacaagtttaaggacagtgtggacagctatatt
gaagaagctgtagtacgacgggagctggcagacaacttttgtttttacaataaacaatat
gacaagattgcaggtgcttctgattgggcacagaaaactttgcaaatgcacagcaaagac
aaacggccatatgtttatacgctgaaagaactggaagatgggcgaacacatgattctttg
tggaatgcagcacagcttcagatgatccatgaggggaagatgcatggttttcttcgaatg
tactgggctaaaaagattttagagtggactgcttcacctgaggaagccttacagttctcc
atctacctgaatgatcgctatgaactggatggcagagatccaaatggatatgtaggttgc
atgtggtcaatctgtggaatccacgaccaaggctggaaagagcgaccaatctttggcaag
attcgctacatgaattataatggctatatccaatattcatcttcacgattgtactggaat
gtcatggacaagaaaatctgttttattattggtttgtaccaacttccatgccacttgagt
caagacattgcattacaataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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