KEGG   Rhizobium tropici: RTCIAT899_CH00215
Entry
RTCIAT899_CH00215 CDS       T02432                                 
Name
(GenBank) alpha-ketoglutarate-dependent dioxygenase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
rtr  Rhizobium tropici
Brite
KEGG Orthology (KO) [BR:rtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rtr03400]
    RTCIAT899_CH00215
Enzymes [BR:rtr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     RTCIAT899_CH00215
DNA repair and recombination proteins [BR:rtr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    RTCIAT899_CH00215
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2
Other DBs
NCBI-ProteinID: AGB69476
Position
47332..47940
AA seq 202 aa
MLLPNGIRHLPGYLDRPAQEALVEAIRTVVAEAPLYTPVMPGTGKEMSVRMTNCGSLGWV
TDKQRGYRYQPTHPVTGRPWPAMPPQLLDLWRDIAGYEKPPEACLVNFYGNDARMGLHQD
CDEQNLKAPVLSVSLGNTCLFRVGGLNRNDRTLSFKLASGDIVVLGGEGRLCFHGVDRIY
PATSTLLKNGGRINLTLRRVQP
NT seq 609 nt   +upstreamnt  +downstreamnt
atgctgctccctaacggaattcgccatctccccggatatctcgaccgccctgcccaggaa
gcgctggtcgaggcgatccgcaccgtcgtggcagaggcgccgctctacacaccggtcatg
ccaggcaccggcaaggaaatgtccgtgcgcatgaccaattgcggttcgctcggctgggtg
acggacaagcagcgcggctatcgctatcagccgacccatccggtcaccggtcgcccatgg
ccggccatgccgccgcaattgctcgatctctggcgcgatatagcaggctatgaaaagccg
cccgaagcctgccttgtcaatttctatggcaacgatgcccgcatgggcctgcatcaggat
tgcgacgaacagaatctcaaggcgcccgtgctgtcggtctcgctcggcaatacctgcctc
tttcgggtcggaggtctcaaccgcaacgatcgcacgctatccttcaagcttgcgagcggc
gatatcgtcgttctcggcggcgaaggaagattgtgcttccacggcgtcgatcgcatctat
ccggcaacgtcgacattgctgaagaacggcggacgcatcaatctgacgttacggcgcgtt
cagccctga

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