KEGG   Rhizobium tropici: RTCIAT899_CH01965
Entry
RTCIAT899_CH01965 CDS       T02432                                 
Symbol
dnaN
Name
(GenBank) DNA directed RNA polymerase III, subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
rtr  Rhizobium tropici
Pathway
rtr03030  DNA replication
rtr03430  Mismatch repair
rtr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RTCIAT899_CH01965 (dnaN)
   03430 Mismatch repair
    RTCIAT899_CH01965 (dnaN)
   03440 Homologous recombination
    RTCIAT899_CH01965 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rtr03032]
    RTCIAT899_CH01965 (dnaN)
   03400 DNA repair and recombination proteins [BR:rtr03400]
    RTCIAT899_CH01965 (dnaN)
Enzymes [BR:rtr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RTCIAT899_CH01965 (dnaN)
DNA replication proteins [BR:rtr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RTCIAT899_CH01965 (dnaN)
DNA repair and recombination proteins [BR:rtr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RTCIAT899_CH01965 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta_2 DNA_pol3_beta DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: AGB69811
Position
complement(404630..405934)
AA seq 434 aa
MQFLWSIADEMANWRPTNRLCLLHSDGEVCQVACPIFRALSENMSLGRLGPPGKSRSKAV
ASMRITIERSNLLKSLNHVHRVVERRNTIPILSNVLLKADGTNLDMKATDLDLEITEATP
ANVEQAGATTVPAHLLYDIVRKLSDGSEVLLATNPDGSSMTVTSGRSKFSLQCLPESDFP
DLTAGSFSHSFKLKASDLKMLIDRTQFAISTEETRYYLNGIFFHTIESGGDLKLRAVATD
GHRLARADVSAPSGSEGMPGIIIPRKTVGELQKLVDTPDAMVTVEVSDAKIRLTIGSIVM
TSKLIDGTFPDYQRVIPANNDKEMRVDCETFAQAVDRVSTISSERGRAVKLALSDGQLLL
TVNNPDSGSATEEVAVGYEMDPMEIGFNAKYLLDITAQLSGDAAIFLLADAGSPTLIRDT
AGDDALYVLMPMRV
NT seq 1305 nt   +upstreamnt  +downstreamnt
gtgcaattcctgtggagcattgccgacgaaatggcgaattggcgcccgacaaatcgccta
tgcctcttgcattcggatggagaagtctgccaagttgcctgtccaatctttcgggccttg
tccgaaaacatgtcgctcgggcgcctcgggccgcccggcaagtcacggtcgaaagcggta
gcatccatgcgtattacaatagagcggtcgaacctcctgaagtcgctgaaccacgtgcat
cgcgtggtcgagcgtcgcaacacgatcccgatcctgtccaacgtgctgctcaaagccgac
ggcacgaaccttgacatgaaggcgaccgacctcgatctcgaaatcaccgaggcgacgccc
gccaatgtcgaacaggccggcgccaccacggttcccgcgcacctgctctacgacatcgtg
cgtaagctgtccgacggatcggaagtgcttcttgccaccaaccccgacggcagctcgatg
acggtcacctccggtcgctcgaaattctcgctgcagtgcctgccggaatccgatttcccc
gatctcactgccggcagcttcagccattccttcaagctgaaggcgtccgatctgaagatg
ctgatcgaccgcacgcagtttgcgatctccaccgaggagacgcgttactacctcaatggc
atcttctttcacacgatcgaaagcggcggcgacctgaagctccgcgctgtcgccaccgac
ggccatcgcctggcgcgcgccgatgtcagtgcgccttccggctccgaagggatgcctggg
atcatcatcccacgcaagactgtgggagaactgcagaagctcgtggatacaccggacgcg
atggtcaccgtcgaagtctccgacgccaagatccgcctgacgatcggctcgatcgtcatg
acctcgaagctgatcgacggtacttttccggactatcagcgcgtcattcccgccaacaac
gacaaggaaatgcgggtcgattgcgagacctttgcccaggccgtcgaccgcgtgtcaacg
atttcttcggagcgtggccgcgccgtgaagctggcactgtccgacggccaactgctgctg
accgtcaacaatccggattctggaagtgcgacggaagaagttgccgtcggctatgagatg
gacccgatggaaatcggcttcaacgccaagtacctgctcgacatcaccgcacagctttcc
ggcgatgcggccatattcctgctggccgatgccggctcgccgacgctcattcgcgacacg
gccggcgacgacgcgctttatgtgctgatgccgatgcgcgtgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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