KEGG   Rickettsia typhi TH1527: RTTH1527_04100
Entry
RTTH1527_04100    CDS       T01802                                 
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
rtt  Rickettsia typhi TH1527
Pathway
rtt03030  DNA replication
rtt03430  Mismatch repair
rtt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rtt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RTTH1527_04100
   03430 Mismatch repair
    RTTH1527_04100
   03440 Homologous recombination
    RTTH1527_04100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rtt03032]
    RTTH1527_04100
   03400 DNA repair and recombination proteins [BR:rtt03400]
    RTTH1527_04100
Enzymes [BR:rtt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RTTH1527_04100
DNA replication proteins [BR:rtt03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RTTH1527_04100
DNA repair and recombination proteins [BR:rtt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RTTH1527_04100
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA AAA_22 AAA_14 RuvB_N AAA_5 AAA_30 AAA_19 AAA_18 ResIII AAA_assoc_2 AAA_16 TIP49 RNA_helicase AAA_24 Viral_helicase1 Rad17 nSTAND3 AAA_17 Ribosomal_S13
Other DBs
NCBI-ProteinID: AFE54685
Position
1091301..1092503
AA seq 400 aa
MLENSSNQYIPFARKYRPNNFTELQGQEVLVKILSYTILNDRLVGGYLLTGIRGVGKTTS
ARIIAKAVNCSALITENMTIKTCEKCTNCVSFNNHNHPDIIEIDAASKTSIDDIRRIIES
AEYKPLQGKHKIFIIDEVHMLSKGAFNALLKTLEEPPPHVIFIFATTEVQKVPSTIISRC
QRYDLRRLSFEEIFKLLKYITKQENLIADIEALRIIAHKSEGSARDAVSILDQAASMSAK
SDNIISSQIINQMLGLVDASFILEFIEKIISKETEKAINLINKLYYRFSVNLETFIQSVA
DFIAYLNKVKILPNYSLPIYESFNYRTKSILAKISLAHLSILWQIYNKGVTEIKISYNQL
IETEMLVIKSIYSTSLPLLNDSNANIMNADNSGIKKNLKF
NT seq 1203 nt   +upstreamnt  +downstreamnt
gtgctagaaaattcatctaatcaatatattccttttgcaaggaaatatcgtcctaataat
tttactgaactgcaagggcaagaagtactagtaaaaattttaagctatactattttaaac
gatagactagtcggaggttatcttttaactggtattagaggtgttggcaaaactacctca
gctcgtattattgctaaagccgtaaattgttctgccttaattactgaaaatatgactatt
aaaacatgtgaaaaatgcacaaattgtgtcagttttaataatcataatcacccagatata
attgaaattgacgcagcaagtaaaactagcatagatgatatacgtagaattatagaatct
gctgaatataaacctctacaaggtaaacataaaatctttattattgatgaagtgcatatg
ctctctaaaggagcatttaacgcacttcttaagactttagaagaaccaccacctcacgta
atatttatttttgcaacaactgaagtacaaaaggtaccttcaactattatctcaagatgt
caacgttatgatttaagacgtttaagttttgaagaaatctttaagctacttaaatatata
actaagcaagaaaatttaatagcagatatagaagcattaagaattatagctcataagtct
gaaggttcagcacgtgatgcagtgtctattttagatcaagcagctagtatgtctgcgaaa
tctgataatataattagttctcaaataattaatcaaatgcttggacttgttgatgcttca
tttatattagaatttatagaaaaaataattagtaaagaaacagaaaaagctataaattta
ataaataagctttattatcgtttttcggttaatcttgaaacttttatacaatcagtagca
gattttattgcttatcttaacaaagtaaaaatattacctaattatagtctaccaatatat
gaatcatttaattataggactaaaagcatattagctaaaatcagtttagcacacttatca
atcttatggcaaatatataataagggagtcacagaaataaaaatttcctataatcaacta
atagagacggaaatgttagttataaaatctatatattcaacgtcactgccgctacttaat
gattctaatgctaatataatgaatgcagataattcaggaataaaaaaaaatttgaaattt
tag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (21)   
   Pfam (21)   
All databases (33)   

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