KEGG   Rickettsia typhi Wilmington: RT0447
Entry
RT0447            CDS       T00193                                 
Symbol
pdhD1
Name
(GenBank) Diaphorase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rty  Rickettsia typhi Wilmington
Pathway
rty00010  Glycolysis / Gluconeogenesis
rty00020  Citrate cycle (TCA cycle)
rty00260  Glycine, serine and threonine metabolism
rty00280  Valine, leucine and isoleucine degradation
rty00310  Lysine degradation
rty00380  Tryptophan metabolism
rty00620  Pyruvate metabolism
rty00630  Glyoxylate and dicarboxylate metabolism
rty00640  Propanoate metabolism
rty00785  Lipoic acid metabolism
rty01100  Metabolic pathways
rty01110  Biosynthesis of secondary metabolites
rty01120  Microbial metabolism in diverse environments
rty01200  Carbon metabolism
rty01210  2-Oxocarboxylic acid metabolism
rty01240  Biosynthesis of cofactors
Module
rty_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rty_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rty_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:rty00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RT0447 (pdhD1)
   00020 Citrate cycle (TCA cycle)
    RT0447 (pdhD1)
   00620 Pyruvate metabolism
    RT0447 (pdhD1)
   00630 Glyoxylate and dicarboxylate metabolism
    RT0447 (pdhD1)
   00640 Propanoate metabolism
    RT0447 (pdhD1)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RT0447 (pdhD1)
   00280 Valine, leucine and isoleucine degradation
    RT0447 (pdhD1)
   00310 Lysine degradation
    RT0447 (pdhD1)
   00380 Tryptophan metabolism
    RT0447 (pdhD1)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RT0447 (pdhD1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rty04147]
    RT0447 (pdhD1)
Enzymes [BR:rty01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RT0447 (pdhD1)
Exosome [BR:rty04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RT0447 (pdhD1)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored HI0933_like NAD_binding_8 AlaDh_PNT_C GIDA UDPG_MGDP_dh_N Thi4 FAD_binding_3 DAO Lycopene_cycl 3HCDH_N
Other DBs
NCBI-ProteinID: AAU03923
UniProt: Q68WR9
Position
572799..574178
AA seq 459 aa
MQEFDLVVIGSGPAGYTGSIRAAQLGLKVACIEKNDTLGGTCLNIGCIPSKALLNTSKKY
EETLRYFENIGIIADTKLDLQKMLSNKDKIVLDLTKGIESLFVKNKVTKIKGEAKIISNN
IVEVNKEHIKASNILIATGSSVIGIPTVIIDEEFIVSSTGALKLSKVPEHLIVVGGGYIG
LELGSVWRRLGSKVTVIEYASSIVPMLDKEIAKQFMTIQQKQGIKFKLNTKVVASEVRSG
KVNLTIEEADKRSIITSDVVLIAVGRKAYTKNLGFESIGITTDNQGRIEINEYFQTAVSN
IYAVGDVVKGAMLAHKAEEEAIAAVEIIAGQAGHVNYNLIPSVIYTYPEVASVGATEQQL
QEQGIHYKVGKFPFLANSRARAIGSTEGMVKILADSKTDRVLGAHIIGSDAGTLIAELIA
YMEFGASTEDIARTCHAHPTLSEAIKEAALSVDKRTINI
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgcaagaatttgatttagttgtaataggtagcggacctgctggctatacaggtagtatt
agagctgctcaattaggattaaaagtagcatgtattgagaaaaatgatactttaggtggc
acttgtttaaatataggttgcataccgtctaaagctctacttaatacttctaaaaaatat
gaagagaccctcagatattttgagaatataggtattatcgcggatacaaaactagactta
caaaaaatgttatctaataaagataaaatagttttagatcttacaaaaggtatagaaagc
ttatttgttaagaataaggttacaaaaataaaaggagaagctaaaattatctctaataat
attgttgaagtaaataaagagcacattaaagcaagcaatatcttaattgccacaggttca
agcgttataggcatacctactgtgataatagacgaagaatttattgtttcatctactggt
gctttaaaactttctaaagtacctgagcacttgatagtagtcggtggtgggtatatagga
ttagaacttggttcggtttggcgtcgtttaggttctaaagtaacggttattgagtatgct
tcaagcattgtacctatgcttgataaagaaattgctaagcaatttatgacaatacagcaa
aaacaaggtataaaatttaaactcaatactaaagtagtagcgtctgaagtaaggtcagga
aaagtaaatctgacaatagaggaggctgataaacgatcaataataactagcgatgtcgtt
ttaatagcagtaggtagaaaagcatatactaaaaacctaggatttgagtcaatcggtatt
actacggataatcaaggtagaattgagataaatgaatatttccaaacagctgtgtcaaat
atttacgcagttggtgacgtagtaaaaggtgcaatgcttgctcataaagctgaagaagag
gctattgccgctgtagaaattatagctggtcaagctgggcatgtgaattataacttaatt
ccaagcgttatatatacctatcctgaagtagcaagcgtcggtgcaacagaacaacaacta
caagaacaaggcattcattataaagttggtaagtttccatttttagcaaatagtagagct
agagctattggtagtactgaagggatggttaagatacttgctgatagcaaaactgatagg
gttttaggagcacatattataggatcagatgcaggcactctcattgctgagcttatcgct
tatatggaatttggagcatctactgaagatatagcaagaacatgccatgcacacccaaca
ttaagtgaggctataaaagaagcggctcttagtgtagataaaagaacgattaatatataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (85)   

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