KEGG   Ruegeria sp. AD91A: D1823_14750
Entry
D1823_14750       CDS       T05627                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
rua  Ruegeria sp. AD91A
Pathway
rua03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    D1823_14750 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rua03021]
    D1823_14750 (rho)
   03019 Messenger RNA biogenesis [BR:rua03019]
    D1823_14750 (rho)
Transcription machinery [BR:rua03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     D1823_14750 (rho)
Messenger RNA biogenesis [BR:rua03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     D1823_14750 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_22 OB_RNB NACHT AAA_25 AAA Spore_III_AA
Other DBs
NCBI-ProteinID: AXT27711
UniProt: A0A346SJZ8
Position
2942142..2943413
AA seq 423 aa
MTTESLNLADLKAKSPKDLLAMAEELEIENASTMRKGEMMFQILRERADEGWTVGGDGVL
EVLQDGFGFLRSPEANYLPGPDDIYVSPEMIRLHSLRTGDTVEGDIKAPDENERYFALTK
VTKINFEEPEKAKHKIAFDNLTPLYPDERLKMEIEDPTIKDKSARVIDLVSPIGKGQRSL
IVAPPRTGKTVILQNIAHSIEQNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEP
ATRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKIADKRVF
PAIDILKSGTRKEELLVDKGDLAKTFVLRRILNPMGTTDAIEFLLSKLKQTKTNSEFFDS
MNT
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgacaactgaatctctgaatctggccgatctcaaggccaaaagcccaaaagatcttctg
gcgatggccgaagaactggaaatcgaaaacgcctcgaccatgcgaaaaggcgagatgatg
ttccagatcctgcgcgaacgcgcggatgagggctggaccgttggtggcgatggcgtgctt
gaggttcttcaggacggcttcggtttcctgcgctcgcccgaggcgaactatctgccgggt
ccggatgacatctatgtttcgcctgaaatgatccgcctgcactcgctgcggaccggagat
acggttgaaggtgatatcaaggcacctgatgagaacgaacgttactttgcgctgaccaaa
gttaccaagatcaattttgaagaaccggaaaaagccaagcacaagattgcttttgacaac
ctgacgccgctgtatccggacgagcgtttgaagatggagatcgaggatcccaccatcaag
gataaatcggcccgtgttattgatctggtctcgccgatcggtaaaggccagcgttctctg
atcgtggcaccgccgaggaccggtaaaacggtgatcctgcagaacatcgcgcattcgatc
gaacagaaccacccagagtgctatctgatcgtcctgctgatcgacgaacgcccggaagag
gtgacggacatgcagcgttcggtgaagggtgaggttgtgtcttcgacctttgatgaaccc
gcgacccgccacgtggccgtgtcggaaatggtcatcgaaaaagccaagcgtttggttgag
cataaacgagatgttgtcattcttctcgattcgatcacaagacttggtagggcgtttaac
accgtggtgccatcctcgggtaaagttctgaccggtggtgtggatgcgaatgctctgcaa
cggcccaagcggttctttggtgctgcgcggaatatcgaagaaggtggctcactgaccatc
atcgccaccgcgctgatcgacaccggcagtcggatggacgaggtcatcttcgaagaattc
aaaggtacaggtaactcggaaatcgttcttgatcgcaagattgcggacaaacgcgtgttc
ccggcgatcgacatcctcaaatccggcacgcggaaagaggaactgctggtcgacaaaggc
gatctggccaagaccttcgttctgcgccgtatcctcaacccgatgggcacgactgacgcg
atcgagttcctgttgtccaagttgaagcagaccaagaccaacagtgagttcttcgattcg
atgaacacctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system