KEGG   Ruegeria sp. AD91A: D1823_19020
Entry
D1823_19020       CDS       T05627                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
rua  Ruegeria sp. AD91A
Pathway
rua03030  DNA replication
rua03430  Mismatch repair
rua03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D1823_19020
   03430 Mismatch repair
    D1823_19020
   03440 Homologous recombination
    D1823_19020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rua03032]
    D1823_19020
   03400 DNA repair and recombination proteins [BR:rua03400]
    D1823_19020
Enzymes [BR:rua01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     D1823_19020
DNA replication proteins [BR:rua03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     D1823_19020
DNA repair and recombination proteins [BR:rua03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     D1823_19020
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon HROB DUF655
Other DBs
NCBI-ProteinID: AXT29310
UniProt: A0A346SPJ7
Position
unnamed1:114140..117640
AA seq 1166 aa
MSSSPRFIHLRVHTEYSLLEGAVRLKKLPGLCEKMEMPAVAVTDTNSMFSALEFAVTSSG
AGVQPIMGCQVDLTYVKAQPGEKPKTPAPLVLLAQSETGYENLMKLSTCLYVDKGGQLPQ
VTLEELAERSEGLICLSGGPDGPVGMLLQQGQRPAAEALVDRLAAMFPNRFYIELQRHPG
EDGQPEAERLTERGHIEMAYAKNLPLVATNDVYFPIPDMYEAHDALICISEGAYVDQQEG
RRRLTAQHYFKSQQEMATLFADLPEAIENTVEIAKRCAFMAYRRDPILPKFADDEVAELR
RIANEGLQKRLAVIPHAVTPEEYQERLDFELGIIEGMGFPGYFLIVADFIQWAKDQDIPV
GPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRYV
QQKYGRDKVGQIITFGALLSKAAVRDIGRVLQMPYGQVDRLSKMIPVEGVKPVSIEKALK
DEPRLRESAREEEVVDRLLTYGQQVEGLLRNASTHAAGVVIGDRPLDALVPIYQDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAMDLIFKSGRPLHIAADGTELYEPAEGAE
NQINAIPLDDEATYKLYSAAKTVAVFQVESSGMMDALKRMKPTCIEDIVALVALYRPGPM
ENIPTYCEVKNGLRKIESVHPLIDYILEETQGIIVYQEQVMQIAQVMAGYSLGGADLLRR
AMGKKIKEAMDAERPKFEKGAGENGVDAKKASEVFDLLEKFANYGFNKSHAAAYAVVSYQ
TGWLKANHPVEFMAGVMNCDIHLTDKLAVYFEEVRKGLELPYVPPCVNRSLSTFDVVNGK
LVYALGALKNVGVEAMNLVVKGRADKPFVNLFDFARRVDLKKVGKRPLEMLARAGAFDEL
DKNRRRVFESFDRLVQYSAAIHEQKNSNQVSLFGEAGDDLPEPRLSPTPDWLPAERLSEE
FKAIGFYLSGHPLDDYMPALKRKKVMTLDEVTEKARSGPLIAKMAGVVAGRQERKSAKGN
RFAFAQLSDPTGAYEVTLFSDTLEKCREFLETGAQVVLTAEATMEADQLKLLGRSVGPAD
SLVAEAGATGLRIYVDEAQAVPSVAKVLEDAASAAKGAARGPIQFMLLDPSLPGDVEMDL
GREFPINPQIKGAVKSLEGVMTVEEI
NT seq 3501 nt   +upstreamnt  +downstreamnt
atgagcagttctccacgattcattcacctccgcgttcacactgaatattcccttctggaa
ggcgccgtgcggctgaaaaagctgccgggtctgtgcgagaagatggagatgccagccgtt
gccgtgacggataccaattcgatgttttcggcgctggaattcgcggtcacctcaagcggg
gccggggtgcagccgatcatggggtgccaggttgatctgacctatgtcaaggcccagccc
ggcgagaagccgaagacacccgcgcctctggtgctgctggcgcagtccgagaccgggtac
gaaaacctgatgaagctcagcacttgtctctacgtggacaagggcgggcaactgcctcag
gtcactttggaagaattggctgaacgatctgaaggattgatctgcctgtccggtggaccc
gacggcccggtcgggatgctgctgcaacagggccagcgtcctgcggccgaagcattggtc
gaccggctcgcggcaatgttccctaaccggttttatatcgaactccagcgccatccgggt
gaggatggccagcccgaggcagagagactgaccgaacgtggccatatcgagatggcgtat
gccaagaacctgccgctggtcgccacgaatgacgtctatttcccgataccggacatgtac
gaagctcacgacgcgctgatctgcatatcggaaggggcctatgtcgaccagcaggaaggc
cgccgccgcctgacggctcagcattacttcaagtcacaacaagagatggcgaccctgttc
gccgacttgcccgaggccatcgaaaacaccgtcgagatcgccaaacgctgcgcgttcatg
gcctatcgacgcgacccgatcctgccgaaattcgctgatgatgaggttgccgaactgcgt
cgcatcgcaaatgagggcttgcagaaacgactggcggtgatcccgcatgccgtgacgcct
gaagagtatcaggaacggctggatttcgaactgggcatcatcgaagggatgggtttccct
ggttacttcctgatcgttgcggactttattcaatgggccaaggatcaggacattcccgtc
gggccggggcggggatcgggtgcgggatcgctggttgcctatgcgttgacgatcaccgac
cttgatccgctgcgctacagcctgctgttcgaacgcttcctgaaccccgagcgggtctcg
atgcccgacttcgacatcgacttctgcatggaccgccgcgaagaggtgatccgctatgtt
cagcaaaaatacgggcgcgacaaggtggggcagatcatcactttcggcgcattgctgtca
aaagccgctgtacgcgatatcgggcgggtgttgcaaatgccgtatgggcaggtggatcgc
ctgtcaaagatgatcccggttgagggagtgaaacctgtctccatcgaaaaggcgctgaaa
gacgaaccacgcctgcgcgagtccgcgcgcgaggaagaggtggtcgaccggttgctgacc
tacggccagcaggtcgagggactgttgcggaatgcttcgacccacgcggcaggggtggtg
atcggcgaccggcctctggatgcgctggtgccgatctatcaggacccgcgttccgatatg
cccgcgacccagttcaacatgaaatgggttgaacaggccgggctggtgaagttcgacttt
ctgggcctgaagacgctgaccgtgatccagaacgcaatggacctgatcttcaagtctggg
cgtccattgcacatcgccgccgatggcaccgagctttatgaacccgctgagggggccgaa
aaccagatcaacgccataccgctggatgatgaggcgacatataagctttactcagcagcc
aagaccgtggcggtgttccaggttgaaagttcgggcatgatggatgcactcaagcgcatg
aaacccacctgcatcgaggatattgtggctcttgtggcgctgtatcgtcccggcccgatg
gagaatatcccgacctattgcgaggtcaagaacggattacgcaagatcgagtccgtgcat
cctctgatcgactatatccttgaggaaacgcagggcatcatcgtctatcaggagcaggtg
atgcagatcgcgcaggtcatggcgggctactcgttgggcggcgccgacctgctgcgccgc
gcgatgggtaaaaagatcaaagaggcgatggacgccgaacgcccaaaattcgaaaagggc
gcaggtgagaacggcgtggatgccaagaaggcctccgaagtattcgacctgctggagaaa
ttcgccaactacggcttcaacaaatcccacgccgcggcctatgcggtggtcagctatcag
accggatggctcaaggcgaaccacccggtcgagttcatggccggtgtcatgaactgcgat
atccatctgacggacaagctggcggtgtatttcgaagaagtgcgcaagggactggaattg
ccctacgtgccgccatgcgtgaatcgctcactgtcgacgtttgacgttgtgaacggcaaa
ctggtttacgcgctgggcgctttgaaaaacgtgggcgtcgaggcgatgaatcttgtggtt
aaagggcgcgccgacaagccgtttgtcaatctgttcgactttgcccgccgagtggatcta
aaaaaagtcggcaaacgtccgctggaaatgttggcgcgtgccggggcctttgacgagctc
gacaagaaccgtcgccgcgtgttcgaaagctttgaccgcctggtacagtattcggcggcc
atccatgaacagaaaaactccaatcaggtgtctttgttcggtgaggccggagacgacctg
cctgaaccacgcctgtcgccgacgccggactggctgccggccgagcgcctcagcgaagaa
ttcaaggccatcggcttttacctctcagggcacccgctggacgattacatgcctgcgctg
aaacgaaaaaaggtgatgacgctggatgaggttacggaaaaggcccggtctggtccgctg
atcgccaagatggccggggttgtcgccgggcggcaggagcggaaatcggccaagggcaac
cgctttgctttcgctcagctgtctgatcccaccggcgcatatgaggtgacgctgttttcg
gacacattggaaaagtgccgcgagtttctggaaaccggtgcgcaggtggttctgaccgcc
gaggcgacgatggaagccgatcagctcaagctgctgggccgctcggttggcccggcggat
tcccttgtggccgaggccggggcaaccgggctgcgaatttacgttgacgaagcgcaggct
gtgccttcggtcgccaaggtgctggaagacgccgcctctgccgcgaaaggggctgcaagg
gggccaatccagttcatgttgctggacccaagcctgcccggcgatgtcgaaatggatctg
gggcgcgagttcccgatcaaccctcagatcaagggcgcggtcaaatcgctggagggcgtg
atgaccgtcgaagagatctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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