KEGG   Rubrobacter tropicus: GBA63_10285
Entry
GBA63_10285       CDS       T06510                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
rub  Rubrobacter tropicus
Pathway
rub03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rub00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GBA63_10285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rub03019]
    GBA63_10285
   03016 Transfer RNA biogenesis [BR:rub03016]
    GBA63_10285
Enzymes [BR:rub01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     GBA63_10285
Messenger RNA biogenesis [BR:rub03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     GBA63_10285
Transfer RNA biogenesis [BR:rub03016]
 Prokaryotic type
  tRNA degradation factors
   GBA63_10285
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 KH_1 PNPase KhpA-B_KH KH_2
Other DBs
NCBI-ProteinID: QIN82993
UniProt: A0A6G8Q972
Position
2098690..2100747
AA seq 685 aa
MRLEIPVGERSVVLETGKLAKQAGGSVTAQLGDTVLLSTATRSANPRPGATFLPLSVDIE
ERMTAAGKIPGGFLKREGRPSDRAVLTSRLTDRPIRPLFPKGYHHEIQVIGTVLVADQDT
PYDTVSMVGASAALALSDLPFDGPIGAVRVGRSLDGDFILNPTYSQIAESDLDLVVAGTK
EAITMVEAGANEVPEDVMVEALQLAQETVMAQAQAIDAWAAEHGKPKQPVEEPEENPFLA
DFRAQYFDRIKDGIVQTDRRARREALSDLKNELVEGRDEEEIPQISAALSTLEKEAFRAL
YLQDRKRTDLRAFDEIRPTTAEVSVLPRVHGTGLFTRGETQVLSSLALADLGLSQRLDTI
EPQTGKRYMHHYNFPPYSTGETGRVGSPRRREIGHGALAERALLPVVPGEEEFPYALRII
SEVLESNGSSSMASVCGSTLALMDGGVPIKAPVAGVAMGLVKEGDEYVIMSDIQGLEDHL
GDMDFKVAGTADGITALQMDMKITGVSARLLQEALGQAKEGRLQILDILRGAISEPRSEV
SEFAPRVEVLRIPKEKIGMLIGPGGKTINALQDQFGVNISVEDDGMVHVAGDGAVAKEAA
GAIKGMMKDVEAGDIYNGKVVKTTNFGAFVELTPGRDGLVHISRLAPGKQRVERVEDVVT
EGDLVKVRVLEIDKQNRISLEKLED
NT seq 2058 nt   +upstreamnt  +downstreamnt
atgcgtctagagataccagtaggcgagcgctccgtcgtgctcgaaaccggcaagcttgcc
aaacaggccggcggctcggttacggcccagctcggggacaccgtcctgctctcgacggcc
acccgctcggccaacccgcggcccggggcgacgtttttgcccttgagcgtggacatagaa
gagcgaatgaccgcggcgggcaagatcccgggcggtttcctcaagcgcgaggggcgtcct
tctgacagggccgtcctcacttcgaggctcaccgacaggcccatcaggccgctcttcccc
aagggttaccaccacgagatccaggtaataggcaccgtgctggtcgccgaccaggacacc
ccctacgacaccgtcagcatggtcggcgcttccgcggcgctcgcgctctcggacctaccg
ttcgacggcccgatcggcgccgtgcgcgtcggccgttcgctcgacggggacttcatccta
aacccgacctactcccagatagccgagagcgacctcgacctcgtggtcgccggcaccaaa
gaggccatcactatggtcgaggccggcgcgaacgaggtgcccgaggacgtaatggtggag
gccctgcagctcgcgcaggagaccgtgatggcgcaggcgcaggccatagacgcctgggcc
gccgagcacggcaagcccaagcagcccgtcgaggagccggaggagaacccgtttctcgcg
gacttccgggcccagtacttcgacaggatcaaggacggcatcgtccagaccgaccggagg
gcgcgccgcgaggcgctatccgacctcaagaacgagctcgtagagggccgcgacgaggag
gagatcccgcagatctccgccgccctgtcgacgctcgaaaaagaggcgttccgggcgctc
tatttgcaggaccgcaagcggaccgacctgagggcctttgacgagatccgtccgactacc
gccgaggtctcggtgctgccgagggtccacggcacggggctctttacgcgcggtgagacg
caggtcttgagctctctggcgctggccgacctcggcctctcgcagcggctcgacaccatc
gagccccagacgggcaagcgctacatgcaccactacaactttccgccctactccacgggc
gagaccggccgcgtcggcagcccgaggcggcgtgagatcgggcacggggcgctcgccgag
cgcgccctgctcccggtggtcccgggcgaggaagagttcccctacgccctgcgcatcatc
tccgaggtcctggagtcgaacggctcctcctcgatggccagcgtctgcggctcgacgctc
gcgctcatggacggcggcgtgccgatcaaggcccccgtcgcgggtgttgcgatgggcctc
gtcaaggagggcgacgaatacgtcatcatgtcggacatccagggtctcgaggaccatctg
ggcgacatggacttcaaggtcgccggcacggccgacggcatcacggcgctgcagatggac
atgaagatcacgggtgtgtccgcccggctcttgcaggaggcactcgggcaggccaaagaa
ggccggttgcagatactagatatcctgcgcggcgccatctccgagccccgttcggaggtc
tccgagttcgcgcccagggtcgaggtgctgcgcatcccgaaggagaagatcgggatgctc
ataggccccggcggcaagaccatcaacgcgctccaggaccagttcggcgtcaatatctcc
gtcgaggacgacggcatggtccacgtggccggcgacggcgcggtggccaaggaggccgcg
ggcgccatcaagggcatgatgaaggacgtcgaggccggcgacatctacaacggcaaggtc
gtcaagaccacgaacttcggcgctttcgtcgagctcacccccggccgcgacggcctggtc
cacatctccaggctcgccccgggcaagcagcgggtcgagcgggtcgaggacgtcgtcacc
gagggcgacctcgtcaaggtgcgggtgctcgagatcgacaagcagaaccgcatctcgcta
gagaagctggaggactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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