KEGG   Rufibacter sp. DG15C: TH61_00015
Entry
TH61_00015        CDS       T04326                                 
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
rud  Rufibacter sp. DG15C
Pathway
rud00300  Lysine biosynthesis
rud00550  Peptidoglycan biosynthesis
rud01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rud00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    TH61_00015
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    TH61_00015
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rud01011]
    TH61_00015
Enzymes [BR:rud01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     TH61_00015
Peptidoglycan biosynthesis and degradation proteins [BR:rud01011]
 Precursor biosynthesis
  Amino acid ligase
   TH61_00015
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase DUF6305
Other DBs
NCBI-ProteinID: AMM49880
UniProt: A0A127AXP2
Position
complement(1925..3388)
AA seq 487 aa
MAQLQNLLQAIPSSQLLGPTNPELSALTMDSRQAGPGVAFFAIKGTVRDGHDFIPQTVEQ
GVSVVFSEKQPENAPANVTFVLVPDVAEAMGHVAAAFYGHPSRKLKLVGVTGTNGKTTCV
TLLHKLFRELGYNASLLSTVQNQINEEVIPATHTTPDAITLQALLAKMVKAGCTHAFMEV
SSHALVQHRVTGVEFAGAVFTNLSHDHLDYHKTFDEYIRAKKLFFDNLSPKAFALVNSDD
KRGMVMLQNTKADKKTYALRKEADFKARLLDNSIQGLQLELDGQEVWFKLIGTFNAYNLL
AVYGAAVLLGEDPQEVLTSLSSLTSAAGRFDYVVSPGQITGIVDYAHTPDALENVLQTIQ
QIRKPEQKVITIVGCGGNRDATKRPIMADIAARMSDRVILTSDNPRDEDPQEILNQMQVG
VKHTDLKKALSVVDRKEAIKTAVMLAEPDDIILVAGKGHETYQEVKGQRSPFDDKQVLQE
AFTLLQK
NT seq 1464 nt   +upstreamnt  +downstreamnt
atggcacaactacaaaacctattgcaggcgataccgtcctcgcaattgctcgggcctact
aaccccgagctttctgcgttaaccatggactcgcgccaggcgggcccgggcgtggcgttt
tttgccatcaagggcaccgtacgcgacggtcatgactttataccccagactgtagagcaa
ggcgtttctgtcgtgttttctgaaaaacagcccgaaaacgcccctgccaacgtcaccttt
gtgctagtgccagacgtagccgaggccatgggtcacgtagcggcggccttctacggtcat
ccctccaggaaattgaaactggtaggcgtgactggcaccaatggcaaaaccacctgcgtc
acactgttgcataagctgttccgggagctgggctacaatgctagtctactgtcaacggtt
caaaatcagattaacgaggaggtgattccggccacgcacaccacgccagatgccatcacc
ttgcaggctttgctggcaaagatggtgaaagcgggttgcacgcacgccttcatggaagtg
agttcgcatgccttggttcaacatagagtgaccggggtggagtttgccggagcggtcttc
accaacctctcgcatgaccacctggactaccacaagacctttgacgagtacatcagagcc
aagaaactcttctttgacaacctgtctccgaaggccttcgcgctggtgaactcagacgac
aagcgcggcatggtcatgttgcagaacaccaaggctgataagaaaacctacgccttgcgc
aaagaggctgacttcaaagcgcgtctcttagataactccatccaaggtctgcaactggaa
ttggacggccaggaagtgtggttcaagctcatcgggaccttcaacgcttataacctgctg
gccgtgtacggtgcggcagtgctgctaggcgaagaccctcaggaagtgttgactagccta
tcttccttgacttcggccgccggtcgttttgactacgtggtgagcccgggccagattacc
ggaattgtggactatgcccacacgcccgacgcgctggagaacgtattgcagaccatccag
caaatcagaaagcccgagcagaaagtcatcaccattgtgggttgcggcggaaaccgtgac
gcgaccaagcgccccatcatggcagacattgccgcccgcatgagcgacagagtcatcttg
acctcagacaaccctcgcgacgaggacccacaggaaatcctgaaccagatgcaggtgggc
gtgaagcacaccgatttgaaaaaggccctaagcgtggtagaccgcaaagaagctattaaa
actgccgtgatgctcgccgagccggatgatatcattctggttgcgggcaaagggcatgag
acttatcaagaggtgaaaggacaacgctctccttttgacgacaagcaagttctgcaggag
gcatttaccctgctccagaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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