KEGG   Rufibacter sp. DG15C: TH61_15345
Entry
TH61_15345        CDS       T04326                                 
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
  KO
K06168  tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
Organism
rud  Rufibacter sp. DG15C
Brite
KEGG Orthology (KO) [BR:rud00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rud03016]
    TH61_15345
Enzymes [BR:rud01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.3  tRNA-2-methylthio-N6-dimethylallyladenosine synthase
     TH61_15345
Transfer RNA biogenesis [BR:rud03016]
 Prokaryotic type
  tRNA modification factors
   Methylthiotransferases
    TH61_15345
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM TRAM_2
Other DBs
NCBI-ProteinID: AMM52294
UniProt: A0A127B4S7
Position
3576423..3577862
AA seq 479 aa
MHAPILDLDFIDSRTPDEAAAASCDTKVSVDTFTGRQRKLYIESYGCQMNFSDSEIVSSI
LFEAGFDTTSDLKQADLVLLNTCSIREKAETTVRHRLLQLQHMKKKRPGMMVGVLGCMAE
RLKKNLLEEEKMVDLVVGPDAYRDLPSLINEVDSGQKAVNVLLSREETYADINPIRLNSN
GVSAFVSIMRGCDNMCSFCVVPFTRGRERSRDAHSVVREAEELVKNGYKEVTLLGQNVDS
YKWTSEDGAEHVNFAQLLERVALISPDLRVRFSTSHPKDITDEVLYTMKKYDNICKYIHL
PAQSGNSRILDLMNRTYDRAWYIARVDAIRNILGEECAISTDMISGFCSETEEEHQDTLT
LIDYVQYDYAYMFFYSERPGTLAARKLEDDIPLEVKKRRLQEVIDLQRSYSLIRNEKTVG
TVQKVLLEGFSKRSQDMLSGRDDKNRMVIIPKMDFQKGDYVNVLITGCSVGTLFGEPIL
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgcacgcacccattctggacttagattttatagatagccgcacgcctgatgaagcagcg
gccgcttcctgtgacaccaaagtgagcgtagataccttcactggccgtcaaaggaaactc
tacatagaaagctacggctgccagatgaacttctctgacagcgagattgtctcttccatt
ctcttcgaggccggctttgacactacctcagacttaaagcaggcagatttagtcttgcta
aacacctgttctatcagagagaaggctgagaccaccgtacgccaccgcttgctgcaattg
cagcacatgaagaagaagcgccctggcatgatggtgggcgttttgggctgtatggcagaa
cgcttaaaaaagaacctactggaagaagagaaaatggtggacctagtagtaggcccagac
gcctaccgcgaccttccttccctcatcaatgaagtagacagcggccaaaaggcggtgaac
gtattgctttcacgtgaagagacgtacgccgacatcaaccccatccggttaaacagcaac
ggcgtgagcgcttttgtgtccattatgcggggctgtgataacatgtgctccttctgcgta
gtgccatttacccgtggccgtgaacgcagccgtgacgcacattcagtagtgcgtgaggct
gaagagcttgtaaaaaatggttataaagaagtaaccctgctgggtcagaacgtggactct
tataagtggacctctgaggatggcgctgagcatgtgaacttcgctcaactcttagaacgc
gtagccttaatcagcccagatttgcgcgttcgcttctccacttcgcaccccaaagacatt
acagatgaggtgttgtacaccatgaaaaagtacgacaacatctgcaagtacatccaccta
cctgcccaaagcggaaactccagaatcctggacttgatgaatcgcacctacgaccgtgct
tggtacattgcccgcgtggatgccatccggaatattctgggcgaggagtgcgccatttcc
acggacatgatctcgggcttctgctctgagacggaagaggagcaccaggacacgctaacc
ctcattgactacgtgcagtacgactacgcgtacatgttcttctattctgagcgccctggt
acgctggctgcgcgtaagttggaagatgacatccctttggaagtgaaaaagcgtcgcctg
caagaggtgattgacttacaacgcagctattccttgatccggaatgagaagacggtgggc
accgtacagaaagtgttactggaaggattctccaagcgctcccaagacatgctgagtggc
cgcgatgataaaaaccgcatggtcatcatccctaaaatggatttccagaaaggcgactat
gtgaatgtgctcatcacgggctgttcagtgggcaccttgtttggcgaacctatcctataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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