KEGG   Ruminococcus bovis: E5Z56_01270
Entry
E5Z56_01270       CDS       T05998                                 
Name
(GenBank) M20 family metallopeptidase
  KO
K01439  succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
ruj  Ruminococcus bovis
Pathway
ruj00300  Lysine biosynthesis
ruj01100  Metabolic pathways
ruj01120  Microbial metabolism in diverse environments
ruj01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:ruj00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    E5Z56_01270
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ruj01002]
    E5Z56_01270
Enzymes [BR:ruj01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     E5Z56_01270
Peptidases and inhibitors [BR:ruj01002]
 Metallo peptidases
  Family M20
   E5Z56_01270
SSDB
Motif
Pfam: Peptidase_M20 M20_dimer Peptidase_M28 AsmA_2 BD-FAE
Other DBs
NCBI-ProteinID: QCT06078
UniProt: A0A4P8XYZ8
Position
259525..260892
AA seq 455 aa
MYFGKNILKYKEDILKDLKTLISFQSISGENQGDCEQALNFILDKAKEFGLDSKNIENIA
GHAQLGNSGDLCGVLTHLDVVPAGNNWDSLPFELTRKDGRLYGRGVADDKGAALITLYCL
KALKDAGVEGKNTLRAIYGTDEEKGMKDMETYFENEKMPEYSFTPDSDYGICQCEKGILQ
LEITAETNDGTTLNEFHAGKAVNIVPDTAYAMVDCSEYDDHNLVRFADAMDCDFDFHYTI
DGVMIISHGRASHACVPNKGKNAATALVELLASNFNYVQLGSLCSFINSSIGLETNGNSL
GIKMRDSISGELTVNVGSIQIDDKSAKAKIDVRYPVTMDGNVILYRIKKIASKDNLHVKV
LSHLKPLNMDENAPIISLLKSAYSEVMGEEPELYSTGGGTYARMLDNKGVAFGPVFKDDT
SNMHNANESLDEEKFFKHAEICLEAMYRLYTGNFD
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgtattttggtaaaaacattttaaaatataaagaggacattctaaaggacttaaagact
ttaatttctttccaatctatttcaggtgaaaatcagggagattgtgaacaggcacttaac
tttattcttgataaagctaaggaatttggtcttgattctaagaatattgaaaatattgcc
ggtcatgcacagcttggcaacagtggtgacttatgtggtgtacttactcaccttgatgtt
gtacctgcaggtaacaactgggattcactaccatttgaattaacaagaaaagacggcaga
ctatacggcagaggtgttgctgatgataaaggtgctgcacttattactctttactgctta
aaggcacttaaggatgccggtgttgaaggtaaaaacaccttgagagctatttacggtact
gatgaagaaaaaggtatgaaagatatggaaacatattttgaaaacgagaaaatgcctgaa
tatagctttacacctgacagtgactatggtatttgtcaatgtgaaaagggtatcctacaa
ctggagattactgctgaaactaatgacggtacaacacttaatgaatttcatgccggtaag
gcagtaaacattgttcctgatactgcttacgctatggttgactgtagtgaatatgacgac
cacaacctagtaagatttgcagatgctatggactgtgactttgacttccactacacaatt
gacggtgttatgattatttctcacggtagagcaagtcatgcttgtgtacctaacaaaggt
aaaaatgctgctactgcacttgtggaactacttgcatctaactttaactatgttcagtta
ggttcactatgttcattcatcaattcatcaatcggtcttgaaactaacggtaattcccta
ggcatcaaaatgagagacagtatttccggtgaattaacagtaaatgttggttcaattcaa
attgatgataaatcagctaaagctaagattgatgttcgttatcctgttacaatggatggc
aatgttattctgtatagaattaagaaaattgcaagtaaagacaatcttcatgttaaggta
cttagccacctaaagccacttaatatggacgaaaatgctcctattatctcactgctaaag
tcagcttacagtgaagttatgggtgaagaacctgagctatattctacaggtggtggaaca
tatgcaagaatgttagacaacaagggtgttgcctttggtcctgtatttaaggatgacaca
agcaatatgcacaatgctaacgaaagtcttgatgaagaaaagttctttaaacatgcagaa
atttgcttagaggctatgtacagactttacacaggcaactttgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system