KEGG   Ruminococcus bovis: E5Z56_02575
Entry
E5Z56_02575       CDS       T05998                                 
Name
(GenBank) deoxyribonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
ruj  Ruminococcus bovis
Pathway
ruj03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ruj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    E5Z56_02575
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ruj03400]
    E5Z56_02575
Enzymes [BR:ruj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     E5Z56_02575
DNA repair and recombination proteins [BR:ruj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     E5Z56_02575
SSDB
Motif
Pfam: AP_endonuc_2 RE_HaeII
Other DBs
NCBI-ProteinID: QCT06306
UniProt: A0A4P8XTJ0
Position
complement(534023..534856)
AA seq 277 aa
MLNIGAHLSISKGILACGKEATSIGANTFQFFTRNPRGGKAKEIDSKDTNALLEYMKENN
FSKILAHAPYTLNPCSKTEKTREFALETMKDDLRRMEYLPNNLYNFHPGSHVGQGIEKGI
ELIVNQLNEVLFEDMTTTVLLETMAGKGTEVGSKFQELKEILDGVTLNEKMGVCLDTCHV
FDGGYDIKDNLEDVLEEFDKIIGIHKLKAIHLNDSKNFLGCHKDRHEKIGEGGIGLDALV
GVINHPKLKDLPFFLETPNDLDGYKSEITLLRENYKF
NT seq 834 nt   +upstreamnt  +downstreamnt
atgctaaatataggagcacatttatcaatatcaaaaggaattttagcttgtggcaaagag
gctacttcaatcggtgcaaatacatttcaatttttcaccagaaacccaagaggtggcaag
gctaaagaaattgattctaaagatacaaacgctttgcttgaatatatgaaagaaaataac
ttttcaaaaattttagcccatgcaccatatacccttaatccttgttcaaaaaccgaaaag
actagggaattcgcccttgagacaatgaaagatgatttaagaagaatggagtatctgcca
aacaacttatataactttcatcccggcagtcatgtaggacaaggcatagaaaagggaata
gagcttattgtaaatcaactgaatgaagttttgtttgaagatatgactacaacagtgtta
ttagaaactatggcaggtaaaggtacagaggtaggctcaaaatttcaggaattaaaagaa
atacttgatggtgttacccttaatgaaaagatgggtgtttgcttagacacttgccatgta
tttgacggtggctatgatattaaagacaatttggaagatgtgctggaagaatttgataag
attatcggtattcataagctaaaggccatccacctaaacgacagtaaaaatttcttaggt
tgccacaaagaccgtcacgaaaaaatcggtgaaggtggtatcggcttagatgccctagtt
ggtgttatcaatcaccctaagctaaaggacttgcctttcttcctagaaacaccaaatgat
ttagacggctataaatcagaaatcaccttgctaagagaaaattataaattttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system