KEGG   Ruminococcus bovis: E5Z56_08825
Entry
E5Z56_08825       CDS       T05998                                 
Name
(GenBank) type I restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
ruj  Ruminococcus bovis
Brite
KEGG Orthology (KO) [BR:ruj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ruj02048]
    E5Z56_08825
Enzymes [BR:ruj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     E5Z56_08825
Prokaryotic defense system [BR:ruj02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   E5Z56_08825
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N ResIII DEAD Ribosomal_S2 SNF2-rel_dom Nucleolin_bd
Other DBs
NCBI-ProteinID: QCT07447
UniProt: A0A4P8XWP7
Position
1873269..1876325
AA seq 1018 aa
MPYTESSYENAIIQLFEEMGYTHAYGPDIERDYKVPYYADELTAALYRLNPSLPEEAISD
ALYKLTNYENGELVQKNAVFMDYLQNGVEVRYTEKGEERSALCYLVDYSNIDNNSFVVAN
QWTYIENSEKRPDVLLFINGLPVVLMELKSPSREETDASEAYTQIRNYMHAIPSMFIYNA
ICVMSDLSENRAGTITSGEDRFMEWKTKDGSYENTQYAQFDTFFEGIFQKERLLDILKNF
ILFSNEGLKQYKILAGYHQYFAVRKAVESTKKATVTDGKGGVFWHTQGSGKSLSMVFYAH
LLQSELESPTIVVITDRNDLDDQLYSQFAKCKDFLRQEPVHAESREHLKSLLEGRKANGI
IFTTMQKFEESGEPLSERRNIIVMADEAHRGQYGLTERIKMTKNEKGELVAKKVIGTARI
IRDTLPNATYIGFTGTPIATEDRNTREVFGDYIDIYDMTQAVEDGATRPVYYESRVMKLK
LDETTLHLIDTEYDIMAQSADPDVIEKSKRELGQMEAILGHDDTIKSLVDDILDHYENYR
EDLLTGKAMIVAYSRAIAMKIYKRILEVRPSWTEKVAVVMTGSNKDPEEWHEIVGNKRHK
EELAKKFKDNNSPLKIAIVVDMWLTGFDVPSLATMYVYKPMAGYNLMQAIARVNRVFRDK
EGGLVVDYIGIASALKQAMNDYTVRDRKNYGNTDIAQVAYPKFIEKLTVCRDLLHGYDYS
AFFGGNELTAGRTITGAVNFLLDRSRENDKESYVKEALLLKQALSLCSSIAEEQEREEAA
FFEAVRVLIMRIQNQGGNKKLSLPEINAKINELLKQSIKSDGVINLFSDKEQEFSLFDPK
FLEEIARMKEKNLAVELLKKLIAEQVQIYKRTNLVKSEKFSEIMQSAMNRYLNGMLTNEE
VIEEMLNLARQIREAKEEGEELGLTADELAFYDALTKPQAIKDFYENEELIAITKELADK
LRKNRTIDWQKRDSARAKMRMMIRKLLKDHKYPPEGMEDAVSTVMSQCELWADNSMDI
NT seq 3057 nt   +upstreamnt  +downstreamnt
atgccctacaccgaatcaagctatgaaaacgctatcatacagctttttgaagaaatggga
tatacccatgcctacggaccggatattgagcgtgattataaagtaccatattatgcggac
gagctgaccgcggcattataccggctgaatccgtcgctgcctgaagaagccatctccgac
gcgctttacaagttgacaaattatgagaacggcgaattggtgcagaagaatgccgtgttt
atggattatctgcaaaacggtgtagaggtgcgttataccgagaagggcgaggaacgctca
gctctttgctatcttgttgactattccaatattgacaacaactcctttgttgtggcaaat
cagtggacgtatattgaaaactccgaaaaacgtccggatgtgctgctgtttatcaacggc
ttgcctgtggtgctgatggagctgaaatctccctcccgtgaggaaaccgacgcttccgaa
gcctatacacagatccggaattatatgcacgctattccgtcgatgttcatctacaacgcc
atttgcgtaatgagcgacctttcagaaaaccgtgcaggcacgatcacctccggtgaagat
cgctttatggaatggaaaacgaaggacggaagctatgagaacacgcagtacgctcagttt
gacacattctttgaaggtatcttccaaaaagagcgtttgcttgatattctcaaaaacttt
attctgttttccaacgagggcttgaagcaatataaaatactcgccggttatcatcaatac
tttgccgtgcgcaaagcggtagaatcgacaaagaaagcgactgtaacagacggtaaaggc
ggcgtgttctggcatacgcaaggcagcggaaaatcgctgtctatggtgttctacgcccat
ttactgcaatccgagcttgaaagtccgacgatcgttgttatcaccgacagaaatgacctt
gatgatcagctctactcgcagtttgccaagtgcaaggattttctacgtcaggagcctgtt
cacgcagaaagccgtgagcacctgaaatcgttattggaaggaagaaaagccaacggtatc
atttttacaaccatgcagaagtttgaggaatcgggagagcctctttccgagcgcagaaat
attattgtgatggccgatgaagcgcacagaggacaatacggtctgaccgaaagaatcaag
atgaccaagaacgaaaaaggcgagctggttgccaaaaaggtaatcggcacagcccgcatt
attcgtgataccctcccgaacgctacatatatcggttttaccggtacgccgattgctacc
gaggatagaaacacccgtgaggtatttggtgattatattgatatctatgatatgacgcag
gctgtcgaggacggcgcaacacgccctgtctattacgaaagccgcgttatgaaactgaaa
ttagacgaaaccactttgcaccttattgatacggaatatgatattatggcgcagagtgcc
gatcctgatgttatcgagaaaagcaagcgtgagctcggacaaatggaagcgattctcgga
cacgacgatacgatcaaatcgctcgttgatgatattctcgaccactatgagaactaccgt
gaggatcttctgacgggcaaggcaatgatcgtcgcttattcaagggcgatcgctatgaag
atttacaagcggattctggaggttcgtccttcttggacagaaaaggtcgctgtcgtgatg
acaggctccaacaaagatcccgaggaatggcacgagatcgtcggcaacaaacgccataaa
gaagaattggcgaagaagttcaaggataataacagccccttgaaaatcgcaatcgttgtt
gatatgtggctgacaggctttgatgtaccgtcgcttgcgacaatgtatgtttacaagccg
atggcagggtataatttgatgcaggcgatcgcccgcgtcaaccgtgttttccgtgataaa
gaaggcggattggttgttgattatatcggtatcgcttctgcgctgaaacaggcgatgaac
gattacaccgtccgtgaccgcaagaactacggcaacaccgatattgcgcaggttgcctat
ccgaagtttattgaaaagctcacggtttgtcgtgacctgctgcacggttatgattattcc
gctttctttggcggcaatgaattgactgctggaagaacgattaccggcgctgtcaacttc
ttgttggacagaagccgtgagaatgataaggagagttacgttaaagaagcgttattgctg
aaacaggcgttatcgctttgttcgtctattgcagaggaacaggagcgtgaagaagctgca
ttctttgaagcggttcgagtattgataatgcgtatccaaaatcagggtggaaacaaaaaa
ctctcgctgcctgaaatcaacgctaaaatcaatgagcttttgaagcagagcattaagagc
gatggcgtaatcaatcttttctccgataaggaacaggagttctcgttatttgatccgaag
ttccttgaagaaatcgcaaggatgaaagaaaagaatcttgctgttgagttgttaaaaaag
ttgattgccgagcaggtgcagatttataaacgaactaaccttgttaagtctgagaaattc
agtgaaatcatgcaaagcgctatgaatcgctacctgaacggaatgctgacaaacgaagaa
gtcattgaggaaatgcttaatctcgcacggcaaatccgtgaagccaaagaagaaggcgag
gaactcggattaacagcggatgagcttgcgttttatgacgctctcacaaagccacaggcg
attaaggatttctatgaaaacgaggagttaatcgccattaccaaggagcttgccgataag
ctccggaaaaaccgcacgattgattggcaaaagcgcgacagtgccagagcaaaaatgcgt
atgatgatacgcaagcttttaaaggatcacaaatatccgcccgagggtatggaggatgcg
gtcagcaccgtaatgagccagtgcgaattatgggcggataattcaatggatatttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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