KEGG   Hungateiclostridiaceae bacterium KB18: A4V00_13420
Entry
A4V00_13420       CDS       T04437                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ruk  Hungateiclostridiaceae bacterium KB18
Pathway
ruk03030  DNA replication
ruk03410  Base excision repair
ruk03420  Nucleotide excision repair
ruk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ruk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A4V00_13420
   03410 Base excision repair
    A4V00_13420
   03420 Nucleotide excision repair
    A4V00_13420
   03440 Homologous recombination
    A4V00_13420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ruk03032]
    A4V00_13420
   03400 DNA repair and recombination proteins [BR:ruk03400]
    A4V00_13420
Enzymes [BR:ruk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     A4V00_13420
DNA replication proteins [BR:ruk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     A4V00_13420
DNA repair and recombination proteins [BR:ruk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     A4V00_13420
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A4V00_13420
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc XPG_I
Other DBs
NCBI-ProteinID: ANU54936
UniProt: A0A1C7GT09
Position
complement(2656413..2658980)
AA seq 855 aa
MKLLVLDGNSLLNRAFFGIKLLSTKSGDFTNGIYGFLTMFRKIYDETEPDAVAIAFDMRA
PTFRHKQYAGYKSNRKGMPEELAQQLPVLQQLLKDLGYRIVTCEGWEADDILGTLSAAAE
REGSACVIATGDRDSLQLVSSATTVRLMSTKFGQPQVTVYDEAKIMEEYGVTPHQMIDLK
ALQGDSSDCIPGVAGIGPKGAGELVQKYGSLENIYNNLDDPEIKPAARRKLEASKDNAFM
SYELGTIRRDAPIETDLSQYVPTSGDPQSAGSTMVRLELFSLIEKFGLTAAPAQETTVAA
GRPEVIELPDGAPLLARLEDAGAACFYCHWDKSGELLSLIFAHKDILWRVTPDSAFLLAF
FTNPLIKKHTHDIKPLHRLALSMGCKLESVSLDTALAAYLLNPSATGYDVLRLAAEYSVP
LPDFEQEEYNCAAVMPGLCQALQKAIDGNNQRELLENIEIPLSFVLAQMEHIGFYVDSES
IKEYGEKLQKEVESLHDSIIEQVGYDFNINSPKQLGEALFEKLGLPHGKKTKSGWSTNAD
VLESLRPMNPVVDEILRYRTVAKLKSTYCDGLLKVIGPDGRIHSSFNQTETRTGRISSTE
PNMQNIPVRTPIGRELRKFFAAEHGVLVDADYSQIELRVLAHVANDPAMREDFLQGHDIH
ASTAARVFNMPQELITSQLRSRAKAVNFGIVYGIGAYSLSQDIGVSVKEADAYIKEYLRN
YSGVDAYMKEVADSARETGYVEDMFGRRRYLPELKSSNFNMRSFGERVARNMPIQGAAAD
IIKIAMIRVSRRLEAEGLKARMILQVHDELIVECPQQEQEQVKALLTEEMEQAVNLSVPM
VAEANAGKTWYDAKG
NT seq 2568 nt   +upstreamnt  +downstreamnt
atgaaacttttagtcctcgacggcaacagcctcctcaaccgcgccttcttcggcatcaag
ctcctctccaccaagtccggcgacttcaccaacggcatctacggctttctcaccatgttc
cgaaaaatttatgacgaaaccgagcccgacgccgttgccatcgccttcgatatgcgggcc
cccaccttccgccacaagcagtacgccggctataagtccaaccgcaagggtatgcccgag
gagctggcccagcagctcccggtccttcagcagcttctaaaggaccttggctaccgcata
gtcacctgcgagggctgggaggccgatgacattttgggcaccctctccgccgccgccgag
cgggagggcagcgcctgcgtcatcgccaccggcgaccgggacagcctgcagctggtctcc
tccgccaccaccgtccggctcatgagcaccaagttcggccagccccaggtgacggtctac
gacgaggccaaaattatggaggagtacggcgtgaccccccatcagatgattgacctcaag
gccctccagggcgacagctccgactgcatccccggcgtggcgggcatcggccccaagggc
gcgggggagctggtgcagaagtacggctccctggaaaatatctacaataatctcgacgac
ccggagataaagcccgccgcccgcaggaagcttgaagcttcaaaggacaacgcctttatg
agctacgagctgggcaccatccgccgggacgcgcccattgagacggacctctcccagtat
gtccccacctccggcgacccccagagcgccgggagcacaatggtgcgcctggagctattt
tccctgatagaaaagtttggccttaccgccgcgcccgcccaggagaccaccgtcgccgcg
ggcagacccgaggtcatagagctcccggacggcgcgcccctgctggcccggcttgaggac
gcgggcgcggcctgcttctactgccactgggacaagtccggggagctcctgtcacttatc
ttcgcccacaaggacattttgtggcgtgtcaccccggacagtgcgtttttactggccttc
ttcaccaaccccctcataaaaaagcacacccacgacataaagcccctgcaccggctggcc
ctcagtatgggctgcaagctcgagtccgtctctctggacacggccctggcggcatacctt
ctgaacccctcggccaccggctacgacgtactgcggctggcggcggaatactccgtgccc
ctgccggacttcgagcaggaggaatataactgcgcggcagttatgcccggcctatgccaa
gcccttcaaaaggccatcgacggcaataaccagcgggagcttttggaaaacatcgagata
ccattaagctttgtcctggcccagatggagcatattggtttctatgtggacagcgaaagc
ataaaggagtacggagagaagctccaaaaagaggtggagagcctgcacgactccatcatt
gagcaggtggggtacgacttcaacatcaactcccccaagcagctgggcgaagcccttttc
gagaagctgggcctgccccacggaaaaaagaccaagtccggctggtccaccaatgcggac
gtgctggaatccctgcggcccatgaacccggtggtggacgagatactccgttaccgcacg
gtggcaaagctcaagtccacctactgcgacggactcttgaaggtgatcggccccgacggc
cgaatacactccagctttaaccagaccgagacccgcaccggccgcatctccagcaccgag
cccaatatgcagaacatccccgtgcgcacccccatcggccgggagctccgcaagttcttc
gccgccgagcacggcgtgcttgtggacgcggactacagccagatagagcttagggtcctg
gcccatgtggccaacgaccccgccatgcgggaggactttttgcagggccacgacatccac
gcgtcaactgccgccagggtcttcaatatgccccaggagctcatcacctcgcagcttcgc
agccgggcaaaggcggtgaacttcggcatagtctacggcatcggggcctactccctgtcc
caggatatcggggtcagcgtcaaggaggcggacgcttatattaaagagtacctgcgcaac
tactccggggtggacgcctacatgaaggaggtggcggacagcgcccgggagacagggtac
gtagaggatatgttcggccgcaggagatacctgccggagctcaagagcagtaacttcaat
atgcgctccttcggggagcgtgtagccaggaatatgcccatacagggggcggcggcggat
atcatcaagattgccatgataagggtaagcaggcggctggaggccgagggtctaaaggcc
cggatgatacttcaggtccacgacgagctgatagtggagtgcccccagcaggagcaggag
caggtcaaggcccttctcaccgaggagatggagcaggcggtaaacctcagcgtgcccatg
gtggccgaggccaacgccggtaaaacctggtatgacgcaaaagggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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