KEGG   Roseimaritima ulvae: UC8_03650
Entry
UC8_03650         CDS       T06179                                 
Symbol
rnd
Name
(GenBank) Ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
rul  Roseimaritima ulvae
Brite
KEGG Orthology (KO) [BR:rul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rul03016]
    UC8_03650 (rnd)
Enzymes [BR:rul01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     UC8_03650 (rnd)
Transfer RNA biogenesis [BR:rul03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    UC8_03650 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC RNAseD_HRDC_C
Other DBs
NCBI-ProteinID: QEG38408
UniProt: A0A5B9QH68
Position
538212..539321
AA seq 369 aa
MGFDTEFVSEDRYRPELCLLQIAAGSHLAVVDPLKMADTLPFWDLISSPGRTVIAHAARE
EIRFCYRFTGKPIAGLFDVQLAAGFTGIEYPASLGTLVSRLEGKTLAKGESRTNWRHRPL
SRHQIKYALQDVTELRSMQEKLSDKVHQMQREKWLAEETAALQQAVIDGEELENWRRVSG
LSGLSPRQMEVVRQIWLWREARAEYIDQPPRRVLRDDLVIELAKRETDQVDRIRSVRGME
RRNLTPYYDDIAAAIRTALDTPEADLPRRPRSARRKFSNLLAQFLSMSINCVCRQHQMAP
AIVGNMDSVRELVAYELAGKPDDKLPYLLRGWRSEVVGKSFRDLLSGELAIRVADRHSDE
PLEFIRTKA
NT seq 1110 nt   +upstreamnt  +downstreamnt
gtgggttttgacacggaatttgtgtccgaagaccgctatcgaccggaattgtgtctgctg
cagatcgccgcgggctcgcacttggcggtcgtcgatccgctgaaaatggccgataccctg
cccttctgggacctgatcagctcgcccggccggaccgtgatcgcccatgcggctcgcgag
gaaatccgcttttgctatcgcttcaccggcaaacccatcgcaggcttgtttgacgtccaa
ttagcggccggcttcacgggcatcgagtacccggcttcgttgggcacgctggtcagtcgg
ttggaaggcaagacgctggccaagggcgaatcccgcaccaattggcggcaccgtccgctc
agccggcaccaaattaaatacgccctccaggacgtgaccgaattgcgttcgatgcaggag
aaactgtcggacaaagtgcatcagatgcagcgggagaagtggttggccgaagagactgcg
gccctgcagcaagcggtgatcgacggcgaagagctggagaactggcggcgggtcagcggg
ctgtcgggcttgtcgccgcggcagatggaagtcgtgcgtcagatttggttgtggcgggaa
gctcgagcggaatacatcgaccaaccgccgcgacgcgtgctccgcgacgacttggtgatc
gaattggccaaacgcgaaaccgatcaagtcgatcggatccgttcggtccgtggcatggaa
cgccgcaatctgacgccctactacgacgatatcgcggccgccattcgcaccgcactggat
acgcccgaagccgacctgccccgccggccccgcagcgcacgccgcaagttttccaatctg
ctggcacagttcctctcgatgtcgatcaactgcgtttgtcgccagcaccaaatggcgccg
gccatcgtcggcaacatggacagcgtccgcgagctggtggcctatgaattggccggtaag
ccagatgacaagctgccctatctgttgcgcggctggcgcagcgaagtggtcggcaaatcg
ttccgggatctgttgtcgggcgagctggccatccgagttgccgaccgccactccgacgaa
ccgctagagttcatccgcaccaaggcgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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