KEGG   Roseimaritima ulvae: UC8_56200
Entry
UC8_56200         CDS       T06179                                 
Name
(GenBank) 2',5' RNA ligase family
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
rul  Roseimaritima ulvae
Brite
KEGG Orthology (KO) [BR:rul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rul03016]
    UC8_56200
Enzymes [BR:rul01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     UC8_56200
Transfer RNA biogenesis [BR:rul03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    UC8_56200
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS Dynein_heavy
Other DBs
NCBI-ProteinID: QEG43569
UniProt: A0A5B9QZY3
Position
7761781..7762398
AA seq 205 aa
MRWLIPSRGMAIVRNMKDIRTFIAVPMEANVQKAAKELVHALRDEGDGVRWVPLDDLHLT
LKFLGDVDNTLIPRVCDVVRQCCQDTPPTELHVVGAGGFPNAQRPRVIWAGIDQGGDVLA
GLVERMELAFAELGFKREPRDWMPHLTLGRTRRGGRRPQQLAERIAAHAELDLGWMEARQ
LRVYASYLDKHGPSYHVMDTIPLGA
NT seq 618 nt   +upstreamnt  +downstreamnt
atgcggtggttgatcccatcgcggggaatggcaatagtacgcaacatgaaagacattcgt
acctttatcgccgtcccgatggaagccaacgtccagaaggccgccaaggaattagtccac
gccctgcgagacgagggcgatggcgttcgctgggtcccgctggacgacctacacctaacg
ctgaaattcctgggggatgtcgacaacaccctgattccccgagtctgcgacgtggtccgg
cagtgctgtcaggacacgccgccgaccgaattacacgtcgtcggcgccggcgggtttccc
aacgcccagcgtccgcgggtgatctgggccggcatcgatcaaggcggcgatgtgctggcc
ggtttggtggaacggatggaactggccttcgccgagctgggctttaagcgggagccgcgc
gactggatgccccacctgacactgggacgcacccgccgcggcggccgccgaccgcaacag
ttggccgaacggatcgcggcccacgccgaactggacctgggctggatggaagcccgacag
ctccgcgtctacgccagctatctcgataaacacggccccagctaccacgtcatggacacg
atcccgttgggcgcgtag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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