KEGG T02601: CK1

Ruminococcus sp. SR1/5: CK1_28590

Entry

CK1_28590         CDS       T02601

Name

(GenBank) DNA gyrase subunit A

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

rum Ruminococcus sp. SR1/5

Brite

KEGG Orthology (KO) [BR:rum00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rum03032]
    CK1_28590
   03400 DNA repair and recombination proteins [BR:rum03400]
    CK1_28590
Enzymes [BR:rum01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     CK1_28590
DNA replication proteins [BR:rum03032]
Prokaryotic type
  DNA Topoisomerases
   CK1_28590
DNA repair and recombination proteins [BR:rum03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CK1_28590

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C

Other DBs

NCBI-ProteinID:

CBL20740

Position

2508243..2510795

AA seq 850 aa
MEDNIFDKVHEVDLEKTMKESYIDYAMSVIASRALPDVRDGLKPVQRRVLYSMIELNNGP
DKPHRKCARIVGDTMGKYHPHGDSSIYGALVNMAQEWSTRYPLVDGHGNFGSVDGDGAAA
MRYTEARLSKISMEMLADINKDTVDFQPNFDETEREPVVLPARFPNLLVNGTTGIAVGMA
TNIPPHNLRETINAVVKIIDNIVEEDRETTMEELLEIVKGPDFPTGATILGTRGIEEAYR
TGRGKIRVRAVTNIETLPNGKSRIVVTELPYLVNKARLIEKIAELVRDKKIDGITDLNDH
SSREGMRICIDLRKDANANVILNLLYKHTQLQDTFGVIMLSLVPNHGSMEPKVLNLKEML
EYYLEHQENVVRRRTQYDLNKAQERAHILEGLLKALDNIDEVIRIIRGSRNVQIAKQELI
DRFELTDVQAQAIVDMRLRALTGLEREKLEAEYAELMEKIRKFQAILADRKLLLRVIREE
ILAIAEKYGDDRKTSIGYDVYDISTEDLIPRENTVIAMTKLGYIKRMTVDNFRSQNRGGR
GIKGMQTIEDDYIEELLMTTTHHYLMFFTNTGRVYRLKVYEIPEAGRTARGTAIINLLQL
APGEKITAVIPLRKYEEGHYLMMATKKGLVKKTPIKDYENVRKTGLTAIVLRDDDELIEV
KATDNNKDIILVTRDGQCIRFKETDVRSTGRASMGVRGMNLTDGDEVVAMQLNTQGDYLL
VVSENGMGKRTAMSEFVVQNRGGKGVKCYKITEKTGNVVGAKAVNEENEIMMITTEGIII
RLQCADISVLGRITSGVKMINLTEGVTVASIAKVRDKDPEADTTTEKADGETGDNEEGSA
EEAVTGSEEE

NT seq 2553 nt +upstreamnt +downstreamnt
atggaagataatatttttgacaaagtccacgaagtggatctggaaaaaacgatgaaggaa
tcttacatcgactatgccatgagtgttatcgcctcacgagctttgcctgatgtaagagac
ggtctgaagccggtacagcgtcgagttctgtactctatgatcgagctgaataatggtcct
gacaagccacacagaaaatgtgcgcgtattgtcggtgataccatgggtaaatatcatccg
cacggtgacagctccatctatggtgcgctggtcaatatggctcaggaatggtccacaaga
tatccgctggttgacggacatggaaactttggttctgtggatggtgacggtgcggctgcc
atgcgatatacagaggcacgtctcagcaagatatccatggagatgcttgctgacatcaac
aaggatacggttgattttcagccgaactttgatgaaacagagcgtgagccggttgtgctt
ccggcacgttttccgaaccttttggtaaacggtactacaggtattgcggtaggtatggca
accaatattccgccgcataaccttcgtgaaactatcaatgcagttgttaagatcattgat
aacattgtagaagaagacagagaaacaactatggaggagcttcttgagatcgtaaaggga
ccggacttccctacaggagcgaccatcctcggaacgagagggatcgaggaagcttaccgt
accggacgtggcaagatccgtgtccgtgcggtgacgaatatcgagactttgccaaacggt
aaatcccgtatcgtagttaccgagctcccgtaccttgtaaacaaggcacgtctgatcgag
aagatcgcagagcttgtccgtgacaaaaagatcgacgggatcacagacctgaacgaccat
tccagccgtgagggtatgcgaatctgtattgatcttcgtaaggatgccaatgccaacgtg
atcctgaatctgctttacaagcatacacagctgcaggatacttttggtgtgatcatgctt
tctcttgttccaaatcatggaagtatggaaccgaaggttctgaatctgaaagagatgctg
gagtactatctggagcatcaggagaatgtagttcgcagaagaacacagtatgatcttaat
aaagcacaggagagagcccatattttggagggtcttctgaaggcacttgataatattgac
gaagtgatccgcatcatccgtggttcccgcaacgtacagatcgccaagcaggagctgatc
gaccgttttgagctgacagatgtgcaggcacaggcgatcgtggatatgcgtctccgtgca
ttgacaggtctggaaagagagaagctggaggctgagtatgcagagcttatggagaagatc
cgcaagttccaggcaatccttgctgatcgcaagctccttctccgagtgatccgtgaggag
atccttgccattgcagagaaatacggcgatgacagaaagacttccatcggatacgatgta
tatgatatctctacagaggatctgatcccgagagaaaatacagtgatcgcaatgacaaag
cttggttatatcaagcgtatgaccgttgacaacttccgcagccagaaccgtggcggcaga
ggaatcaagggtatgcagacgattgaggatgactatatcgaagagcttctgatgacgaca
acgcaccattatctcatgttctttactaatacaggacgtgtatacagactgaaggtatat
gagatcccggaggccggtcgtacagccagaggaactgcgatcatcaatcttctgcagctt
gcaccgggagaaaagatcacagctgtgatcccgcttcgtaaatatgaagagggtcattat
ctgatgatggccacaaagaaaggccttgtgaagaaaactccgatcaaggattacgagaat
gtccgtaagacaggtcttacagcaatcgttctccgtgatgatgacgagctgatcgaggtt
aaggctactgataataacaaagatattattcttgtgaccagggacggacagtgtatccgc
tttaaggaaacagatgtccgcagcacaggccgtgcgtccatgggagtaagaggtatgaat
cttactgacggtgatgaagttgttgccatgcagttgaacactcagggagattatctgctt
gtagtttccgagaacggaatgggcaaacgtacagccatgagtgagttcgttgtccagaac
cgtggcggtaagggtgtgaagtgctacaagatcaccgagaagaccggaaatgttgtcggc
gccaaggctgtcaacgaagagaacgagatcatgatgatcactacagagggtatcattatc
cgtctgcagtgtgcggatatctctgttcttggaaggatcacctccggtgtgaagatgatc
aatcttacagaaggtgtaaccgttgcaagtatcgccaaggtaagagataaagatccggaa
gcagatacaactaccgaaaaagctgacggagaaaccggcgataacgaagaaggctctgca
gaggaagctgtcacaggcagtgaagaggaataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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