KEGG   Runella rosea: DR864_15225
Entry
DR864_15225       CDS       T05537                                 
Name
(GenBank) RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
run  Runella rosea
Pathway
run03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:run00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DR864_15225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:run03019]
    DR864_15225
   03009 Ribosome biogenesis [BR:run03009]
    DR864_15225
Enzymes [BR:run01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     DR864_15225
Messenger RNA biogenesis [BR:run03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     DR864_15225
Ribosome biogenesis [BR:run03009]
 Prokaryotic type
  rRNA helicases
   DR864_15225
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 AAA_30 UTP25 AAA_19 DUF5932
Other DBs
NCBI-ProteinID: AXE19003
UniProt: A0A344TK32
Position
complement(3654437..3656149)
AA seq 570 aa
MEVLFDSLGLSEEILKAVTEMGFTKPSPIQAEAIPSLLEGRDVLGQAQTGTGKTAAFGIP
ALEKVDISDKRTQVLMLCPTRELAVQVTEELRRIAKYKKGLKLETVYGGDSIERQIRSLK
IGAQIVVGTPGRVMDLIERKALKLDFVNYVVLDEADEMLDMGFREDIDTILESVPDERQT
VLFSATMSKPIMGIAQKFQEDPVQIKITRKEVTNENIEQTYFEVKQRGKIEVTCRVLDAY
DLKQVIIFCNTKRKVDEVTEELSSKGYSVESLHGDLRQTQRNQVMAKFRSGAANILVATD
VAARGIDVSGIDAVINFDLPLDEEYYVHRIGRTGRAGLTGKALTLVAKDEKYRLRQIETY
TKVKIDKGVIPTFEDIVGVRKARFISQVEEAVSTGDLDLYEDMLGMLHHTTGFTTEQIVA
ALVKINMGVQKSEFADNDLAWDADRDRRPSERGFEKRGRFEDRGGRGEERGSGRFGDRGG
DRGGDRGPKRNEPGMVRLFVSVGRKDRVQPRDIVGAIAGEAGIPGRVIGSIDIFDAYSFV
DVPERDARKVVEAMSGNTIKGKMVNIEVAR
NT seq 1713 nt   +upstreamnt  +downstreamnt
atggaagtactttttgattcattaggcctttcggaagaaattctgaaagcagtaacagaa
atgggttttaccaaaccctcacccattcaggcagaagccatcccgtcccttttggaaggc
cgtgacgtattgggacaagcccaaacaggaacgggcaaaaccgccgctttcggtattcct
gcgcttgaaaaagtagatatctccgacaagcgtacccaagtattaatgttgtgtcctacc
cgtgagttggcggtgcaggtaaccgaagagttacgtcgtattgccaaatacaaaaaaggg
ttgaaactcgaaaccgtttacggtggtgattcgattgaacgtcagattcgttcgttgaaa
ataggtgcccagattgtggtcggaacgcccggtcgtgtcatggaccttattgagcgtaag
gcgcttaagctggactttgtaaattatgtagtattagacgaagccgacgaaatgctcgat
atgggctttcgcgaagatattgataccattctggaaagtgtacccgatgagcgccaaacg
gtgttgttttcggctaccatgtcgaagcccatcatgggcatcgctcaaaaattccaagaa
gatcccgtccagattaaaattacgcggaaggaagttaccaacgaaaacattgagcaaacg
tattttgaagtaaaacaacggggcaaaatcgaagtgacttgccgggtattggatgcctac
gatttaaagcaggttattattttctgtaacaccaaacgtaaagtagacgaagtaaccgaa
gaactttcttccaaaggatattcggtcgaaagtttgcacggcgatttgcgccaaacgcaa
cggaatcaggtaatggcgaagtttcgttcaggagccgccaatatcttggtagccaccgac
gtagccgctcgcggtatcgacgtgtcgggtattgacgccgttatcaactttgacttaccg
ctcgacgaagaatactacgtgcaccgtatcggtcgtactggccgtgctggcttaacgggt
aaagcgctgacgttagtagccaaagatgaaaaataccgtttgcgccagattgagacctac
actaaagtgaaaatcgacaaaggagttattccaacttttgaagacatcgtaggtgtacgc
aaagcccgttttatctcgcaagtagaagaggcggtttcgactggcgatttggatttgtac
gaagatatgttgggtatgttgcatcatactacgggcttcactacggagcagattgtggcc
gcattggttaaaatcaacatgggtgttcagaaaagcgaatttgccgataatgatttggca
tgggatgctgaccgtgaccgtcgcccatcagaaagaggatttgaaaaacgtggtcgtttt
gaagaccgtggcggaagaggcgaagagcgtggctcaggccgcttcggcgaccgtggcgga
gatagaggcggcgacagaggtccaaaacgcaacgaaccgggtatggttcgtctgtttgta
agcgtaggtcgcaaagaccgcgttcaaccacgcgacatcgttggcgccatcgctggcgag
gcgggtattcccggccgcgtgattggctcaattgatatttttgatgcgtactcgtttgtg
gatgttcccgagcgcgatgctcgtaaagtggtggaagccatgagcggcaataccatcaaa
ggtaaaatggtcaatatcgaagtagcacgataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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