KEGG   Rhodomicrobium vannielii: Rvan_0004
Entry
Rvan_0004         CDS       T01353                                 
Name
(GenBank) DNA replication and repair protein RecF
  KO
K03629  DNA replication and repair protein RecF
Organism
rva  Rhodomicrobium vannielii
Pathway
rva03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rva00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Rvan_0004
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rva03400]
    Rvan_0004
DNA repair and recombination proteins [BR:rva03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Rvan_0004
SSDB
Motif
Pfam: SMC_N AAA_21 AAA_23 AAA_15
Other DBs
NCBI-ProteinID: ADP69295
UniProt: E3I476
Position
4163..5365
AA seq 400 aa
MPATDRIAIAKLTLTDFRNYRAVTLVTGLGPVVLAGANGAGKTNCLEAVSLLTAGRGLRS
LPFPELARSGGSGGWAVAAELGVAGEDMHIGTGIQLPPDGMLTPRAARTVKIDHALAKGS
GALVRIRMLWLTPSMDGLFTGPAAERRRFLDRLVLSLDPGYGAAASAFERAMRQRNKALE
EFDSPPMLTAIEAQMAAAAVAMAVARARAIAALSGEIEAERNRDPDSLFPWAALTLNGTL
EEQAAALSEDTMRDELRDGYARALAQGRDRDRAAGRTLSGPHRSDLDVAHGPKAMPARMC
STGEQKALLVGLVLAQARLIKRAADGIAPLILLDEIAAHLDIGRREALFSSIVALNAQVW
MTGTDLATFTPLRNATETQLFVVSNGTIMPANDAERAAKH
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgcccgcaaccgaccgaatcgccatcgccaagctgacgctcaccgacttccgcaattac
agggcggtgacgctcgtaaccggactcggccccgttgtgctcgccggggcgaatggcgcg
ggcaagacgaactgcctcgaagctgtgtcgctgctgacggccgggcgcgggcttcgctcg
ttgccattccccgagcttgcgcgaagcggaggctcgggcggctgggccgtcgctgccgag
cttggcgtggcgggtgaggacatgcatatcggcaccggcatccaactcccgccagatggg
atgctcacgccacgtgcggcgcgcaccgtcaagatcgaccacgcgcttgcgaagggctcc
ggcgcgctggtgcgcatccgcatgctgtggctcacgccctcgatggacggcctgttcaca
ggcccggcagccgagcgccgccgcttcctcgaccggctcgtgttgagcctcgaccccggc
tatggcgcggccgcctccgctttcgagcgcgcgatgcggcagcgcaacaaggcgctcgaa
gagttcgattcgccgccgatgctgaccgccatcgaagcgcagatggcagcggccgccgta
gctatggcggtcgcgcgggcgcgtgccattgcggcgctttccggcgagatcgaagcggag
cgcaaccgcgatccggactcgcttttcccgtgggcggcgcttaccctcaacggcacgctg
gaggaacaggcggccgcgctttcggaagacaccatgcgcgacgaactgcgcgacggatac
gcccgcgctctcgcacaaggccgcgaccgggaccgcgcggcagggcgcacgctgtccggt
ccgcatcgctctgacctcgacgtggcccacgggccgaaggcgatgcccgccagaatgtgc
tcgacgggcgagcagaaggcgctgctcgtcgggctcgtgctggcgcaggcgcggctcatc
aagcgcgcggcagacgggattgcgcctctgattttgctcgatgaaatcgccgcgcatctc
gacatcggccgccgcgaggcgctgttttcgtctattgtcgcgctcaacgcacaggtgtgg
atgacggggacggatctcgccacgttcactcccttgcgaaatgccacagaaacgcagctt
ttcgttgtttcaaacggcactataatgcccgcgaatgatgcagaacgcgctgcgaaacac
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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